Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01634 ATGAGCTTGATTGCGCAGCACACACAACAAGTACGCTTGGATTCGGCAAAATTGAAACTTGATTCTTACCCTCATCACTGGAACTTCTTTGTGGGTATTGATATGGGTTTGCCAAGGTTTGGGCGTCCCAAGAATGATGGTGAGTTGAGTTCGAACCTTTACGTGGCCAATTGTGGGCCCGCAGTGGGGATTTCCGATGATAACATTGCATCTGTGTTCTGCAAATTTGGAGAGCTTAAGGGAGTTTATGCAGCAGATGAGAGTGGGACACGTGTCATTGTGGCGTATGCTGAAGAGGGTTCTGCACAAGCTGCCTTGAAGGCATTACATGGACGCCCATGTCCTGAACTTGGAGGTCGATCCATGCATATCCGTTATTCTGTGCTTCAGCCAACAACACAGGATCAAGCTAGTGACTTGGTTCCTGTATCTATCTCTGCATCAGAAGTGAGCATTCCAGGCCTTTACCTAATTCAAGACTTCATTAGTGCTAAAGAAGAAGAGGAACTGCTTCAGGCTGTTGACTGCAGGCATTGGAACAGTCTTGCAAAAAGAAGGGTTCAACACTACGGTTATGAGTTTCGTTATGATACTAGGAACGTTAATACAAGGCATTGCTTAGGTGAACTTCCGTCATTTGTTTCTCCAATACTAGAAAGAATTTCATCATGTCCAAGTTTCAAGAATGTTAAAAATATAGTTTTGGACCAACTTACGGTAAATGAGTACCCACCTGGAGTGGGTCTGTCCCCTCATATAGACACTCACTCTGCATTTGAAGATTTAATTTTCAGCCTTTCATTATCAGGGCCCTGTATAATGGAGTTCAGACGGTATGAAAATGGTGATCGGCTTCCTAAAGTTGCCTCAAGTTCTATTGCAAAAGCAGAAAATACAGAAGATCAATCAAATTTTATAAGGAGAGCTATCTATCTTCCTCCTCGGTCTTTGCTACTGTTGTCTGGAGAAGCACGTTATGCATGGCATCATTACATTCCACATCACAAGATAGATAAAGTTAATGGCAATATCATTAGAAGAGCTTCAAGAAGGGTATCTTTTACATTTCGTAAGGTTAGAGCAGGTTTGTGCAAATGTGAATTTCCTCAGTATTGCGATTCTCAAAGATAA 1131 0.4209 MSLIAQHTQQVRLDSAKLKLDSYPHHWNFFVGIDMGLPRFGRPKNDGELSSNLYVANCGPAVGISDDNIASVFCKFGELKGVYAADESGTRVIVAYAEEGSAQAALKALHGRPCPELGGRSMHIRYSVLQPTTQDQASDLVPVSISASEVSIPGLYLIQDFISAKEEEELLQAVDCRHWNSLAKRRVQHYGYEFRYDTRNVNTRHCLGELPSFVSPILERISSCPSFKNVKNIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRRYENGDRLPKVASSSIAKAENTEDQSNFIRRAIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGNIIRRASRRVSFTFRKVRAGLCKCEFPQYCDSQR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01634 376 Gene3D - 145 364 IPR037151 -
Viun2g01634 376 Gene3D - 41 142 IPR012677 -
Viun2g01634 376 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 51 129 IPR000504 GO:0003723
Viun2g01634 376 PANTHER OXYGENASE-RELATED 126 372 IPR032857 GO:0070988
Viun2g01634 376 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 234 360 IPR005123 -
Viun2g01634 376 SUPERFAMILY Clavaminate synthase-like 152 360 - -
Viun2g01634 376 SUPERFAMILY RNA-binding domain, RBD 42 132 IPR035979 GO:0003676
Viun2g01634 376 FunFam ALKylated DNA repair protein AlkB homolog 148 363 - -
Viun2g01634 376 Pfam 2OG-Fe(II) oxygenase superfamily 185 357 IPR027450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01634 Viun-Chr2 26052807 26057247 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01634 K10770 - gmx:100777529 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01634 2 26052807 26057247 Viun2g01634 2 26052807 26057247 ECH