Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01599 ATGGCTTCTGCATCAGGGTGTGGACCATTTGAATTCTCTAGCAAGTACTATCATGTGTCTCAGAATGGAGGTGTGTGCGTGAGGCAGACCAGTTTCTTTGAAGGAAAACCAGTGCTTAATCAAGGAGTTGGTTACTCTGTCATTCTTGGTTTTGGTGCTTTCTTTGCTCTTTTCACTTCTTTCTTGGTGTGGCTGGAAAAGCGTTATGTGGGGTCACGTCACACTTCTGAATGGTTTAACACAGCAGGAAGAAGTGTTAAGACAGGGCTTATTGCTAGTGTTATTGTGTCTCAGTGGACATGGGCTGCTACAATACTGCAAAGCTCTAATGTAGCATGGGAATATGGAGTTAGTGGACCTTTCTGGTATGCTAGTGGGGCCACCATTCAGGTATTGTTGTTTGGAATCATGGCCATAGAGATTAAAAGAAAGGCTCCTCATGCTCATACTGTTTGTGAAATTGTCAAGGCACGTTGGGGAACTTCTGCACACGTTGTTTTCCTCTTCTTCTGCTTCTTGACGAACATAATTGTGACAGCTATGTTGCTCCTGGGTGGTTCTGCTGTTGTGAATGCATTAACAGGGGTGAACCTTTATGCTGCTAGCTTTCTAATACCACTTGGAGTAATTGTTTATACCCTAGCGGGTGGACTGAAGGCCACATTCTTAGCAAGCTATATCCATTCTGTCATAGTGCACATTGTTTTGGTGATTTTTGTCTACCTTGTCTACACGGCTAGCAGTGAGCTTGGTAGCCCTTCTGTTGTGTACAATCGCCTCCTAGAGGTTGCAAGCAAATCAAGAACATGTCATGATCCTATATCACACAAAGGGCAATCTTGTGGTCCTGTTGGTGGGAATCACCAAGGTTCTTACCTAACAATGCTGAGTTCAGGTGGCTTGGTGTTTGGGCTTATAAACATTGTTGGCAACTTTGGCACTGTGTTTGTTGACAATGGATACTGGGTGAGTGCCATCGCAGCAAGACCTTCATCAACTCACAAAGGCTACTTGTTGGGAGGCTTGGTCTGGTTTGCTGTGCCATTTTCTTTGGCTACATCGTTGGGTTTAGGAGCTCTAGCCCTTGATTTACCAATAAATGAAAGTGAAGCAGGTCGTGGACTTGTTCCCCCTGCTACAGCAGTAGCTCTGATGGGGCAAGGAGGATCTATTCTTCTTCTTACCATGCTTTTTATGGCAGTGACTTCAGCTGGTTCATCAGAACTAATTGCGGTGTCATCATTATGCACATATGATATCTACAGAACTTACATAAATCCTAATGCGAGTGGAAAGCAAATCCTGAAGGTGTCAAGGGGTGTTGTTCTAGGCTTCGGGTGTCTGATGGGGTTGCTAGCAGTCATACTGAACAAGGCTGGAGTTTCTTTAGGATGGATGTACCTTGCAATGGGAGTTCTGATTGGGTCAGCAGTTCTTCCTATTGCTTTTATGCTTCTATGGAGAAAAGCAAATGCAACTGGAGCCATTCTTGGAACAGTCGCAGGTTGTGTTCTAGGAATTATCACATGGCTGTCTGTCACAAAAGTACAATATGGCAGGGTAAACCTGGATACAACAGGAAGAAATGCACCAATGCTTGCTGGAAACCTTGTCTCTATACTAACTGGTGGAGTTGTGCATGCTATCTGCAGCATGTTGTGGCCTCAGAACTATGACTGGAGCACCACCAAACAAATCACAGTGGTGGAAAAGGAAAAAACTGATCTGCCAGCAGAAGAGTTTAAAGAAGAAAAGCTAATCAGAGCTAAAGCATGGGTGGTGAAATGGGGTATTGGTTTCACTGTTTTGATTGTCATACTGTGGCCTATTCTCTCCCTCCCAGCAGGTGAATTCAGTAAGGGCTATTTCTATTTCTGGGCAGTGATTGCTATAGCATGGGGTAGTGTTGGGTCTGCTGTGATAATTATTTTACCATTAGTGGAGAGCTGGGAGACCATTCAAAGTGTGATGATGGGGATGTTTACAAATGACAGGCTAATGGAAAAGGTTGAAGAGTTAAATTTGAAGTTGCAGACAATTATTCATGCAATACCAGAAGCAGAGAGACTTTACTTGCTTGAGAAGGGAAAGGCCAAAAAGTTAGAAGAAGCCCCGGAACAACATTCTTCTTCTCTTCCTGCATAA 2145 0.4392 MASASGCGPFEFSSKYYHVSQNGGVCVRQTSFFEGKPVLNQGVGYSVILGFGAFFALFTSFLVWLEKRYVGSRHTSEWFNTAGRSVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVLLFGIMAIEIKRKAPHAHTVCEIVKARWGTSAHVVFLFFCFLTNIIVTAMLLLGGSAVVNALTGVNLYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIVLVIFVYLVYTASSELGSPSVVYNRLLEVASKSRTCHDPISHKGQSCGPVGGNHQGSYLTMLSSGGLVFGLINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPINESEAGRGLVPPATAVALMGQGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKQILKVSRGVVLGFGCLMGLLAVILNKAGVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANATGAILGTVAGCVLGIITWLSVTKVQYGRVNLDTTGRNAPMLAGNLVSILTGGVVHAICSMLWPQNYDWSTTKQITVVEKEKTDLPAEEFKEEKLIRAKAWVVKWGIGFTVLIVILWPILSLPAGEFSKGYFYFWAVIAIAWGSVGSAVIIILPLVESWETIQSVMMGMFTNDRLMEKVEELNLKLQTIIHAIPEAERLYLLEKGKAKKLEEAPEQHSSSLPA 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01599 714 PANTHER - 15 699 IPR031155 GO:0015204|GO:0016020|GO:0071918
Viun2g01599 714 Pfam Sodium:solute symporter family 80 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Viun2g01599 714 CDD SLC5sbd_DUR3 45 554 - -
Viun2g01599 714 NCBIfam sodium/solute symporter 79 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Viun2g01599 714 FunFam Urea active transporter 67 577 - -
Viun2g01599 714 ProSiteProfiles Sodium:solute symporter family profile. 44 516 IPR001734 GO:0016020|GO:0022857|GO:0055085
Viun2g01599 714 Coils Coil 663 683 - -
Viun2g01599 714 Gene3D Sodium/glucose cotransporter 68 612 IPR038377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01599 Viun-Chr2 25852062 25855992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01599 7 703 Organic Solute Cotransporters AT5G45380 78.632 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01599 K20989 - gmx:100784391 1291.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01599 2 25852062 25855992 Viun2g01599 2 25852062 25855992 ECH