Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01530 ATGTCGTCGAAGATTGTGTACGAAGGGTGGATGGTGAGGTATGGCCGGCGGAAGATCGGGCGATCGTTCATCCACATGAGGTACTTCGTGTTGGAGTCGCGGCTGCTCGCGTATTACAAGAGGAAACCGCAGGATAATCAGGTCCCAATTAAAACACTGCTAATTGACGGCAACTGCAGAGTGGAGGATAGAGGCTTAAAGACTCATCATGGACATATGGTTTATGTTTTGTCTGTTTACAACAAGAAAGAAAAGAACCATCGAATTATGATGGCAGCATTTAACATCCAAGAGGCCCTGATTTGGAAGGAAAAAATAGAGTATGTTATTGATCAGCACCAGGGAGCTCAACCGTCAAATGGCAACAAATATATTTCTTTTGAGTACAAATCTGGTATGGACAATGGAAAGACAGCTTCTTCCTCAGATCGTGAAAGCCAGTTCAGTGCTCAGGAGGATGAAGATGATCCTCATCCTAATTTGTTAAGAAGGACAACAATTGGAAATGGCCCTCCTGAATCAGTTTTTGACTGGACACGGGAAATAGATTCGGATTTGTCAAATCAGAATATCAACAACCAAGCATTCTCAAGAAAGCATTGGCGTCTTTTACAATGTCAAGATGGACTTCGTATTTTTGAAGAACTTGTTGAAGTTGATTACCTTCCAAGGAGCTGCAGTAGAGCTATGAAGGCAGTAGGTGTTGTGGAGGCGACTTGTGAAGAAATTTTTGAACTTGTGATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCCTACATGGTAGTTTAGTTGAGGAGGTGGATGGGCATACGGCAGTTCTTTATCATCGACTTCAGCTAGATTGGTTCCCAATGTTTGTGTGGCCCCGTGATCTTTGTTATGTACGATATTGGCGCCGAAATGATGATGGAAGTTATGTTGTTCTATTTCGCTCTAGGGAGCATGAAAACTGCAGTCCACAGCCAGGGTGTGTTCGAGCACATATTGAGAGTGGAGGATTTAATATTTCCCCCTTAAAACCTCGAAATGGAAGGCCCAGGACACAAGTCCAGCATCTTATGCAGATTGATCTGAAGGGATGGGGTGTGGGTTACCTGTCATCTTTTCAGCAGTATTGTGTCCGTCAAATGTTAAATAGTGTAGCTGGTTTACGTGAATGGTTTGCCCAATCAGATGAAAGAAATGCTCATCCAAGAATTCCTGTCATGGTTAACATGTCCTCAACATCTGTTTCTTCAAAGAAGAATCAGAAGCCAAATGATTTTTCTGTCAATCCTTCTTCTCTTGATCAAATGAATTCTGCAAGCAGAAACTCTGCCTTGATAGATGAATATTCTGATGATGAAGAAGATTTTCAAATAGCAGAATCTGAACAAGAGGCGTACCAAATTGGTCTTGAGAATGATGTGAAAAGAACAGCTTTGGAAGAAGAACCTGCAAATGAAATTGACTTGTCTTCCTTTTCGGGAAATTTGCGTCGGGATGACCGAGATAATGCTCGGGACTGCTGGAAAATTTCTGATGGAAATAACTTTAGAGTCAGAAGCAAGCATTTTTGCTATGACAAGTCGAAGGTTCCTGCTGGCAAACATATGCTGGATCTTGTTGCTGTAGATTGGTTTAAGGACTCAAAAAGGATGGACCATGTGGCTAGGCGTCATGGTTGTGCAGCCCAAGTAGCTTCAGAAAAAGGATTTTTCTCCTTTGTCATTAATCTTCAAGTGCCTGCATCAACACACTATAGTATGGTTTTTTATTTTGTGACAAAGGAGTTAGTTTCTGGATCCCTGTTGCATCGCTTTGTTGATGGTGATGATGAGTTTCGAAACAGCAGGTTTAAGCTTATACCATCAGTCCCTAAGGGTTCATGGATTGTACGCCAGAGTGTTGGGAGTACTCCTTGTTTGCTGGGAAAGGCAGTTGATTGCAACTACATTCGTGGTCCAAAGTATCTAGAAATTGATGTTGATATTGGTTCCTCTACTGTTGCTAATGGAGTTTTGGGGCTGGTTATTGGTGTGATTACAACATTGGTTGTAGATATGGCTTTTCTTGTACAGGCAAATACTCCTGATGAGTTGCCCGAGAGGCTTATTGGAGCTGTTCGAATTTCTCACTTAGAGCTCAAATCTGCCATCGTCCCAAAACTGGAACCGGATCCATCATGA 2178 0.4233 MSSKIVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKRKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKNHRIMMAAFNIQEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDDPHPNLLRRTTIGNGPPESVFDWTREIDSDLSNQNINNQAFSRKHWRLLQCQDGLRIFEELVEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCSFLHGSLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGCVRAHIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYLSSFQQYCVRQMLNSVAGLREWFAQSDERNAHPRIPVMVNMSSTSVSSKKNQKPNDFSVNPSSLDQMNSASRNSALIDEYSDDEEDFQIAESEQEAYQIGLENDVKRTALEEEPANEIDLSSFSGNLRRDDRDNARDCWKISDGNNFRVRSKHFCYDKSKVPAGKHMLDLVAVDWFKDSKRMDHVARRHGCAAQVASEKGFFSFVINLQVPASTHYSMVFYFVTKELVSGSLLHRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTPDELPERLIGAVRISHLELKSAIVPKLEPDPS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01530 725 MobiDBLite consensus disorder prediction 135 174 - -
Viun2g01530 725 SUPERFAMILY Bet v1-like 185 366 - -
Viun2g01530 725 ProSiteProfiles PH domain profile. 4 111 IPR001849 -
Viun2g01530 725 MobiDBLite consensus disorder prediction 410 438 - -
Viun2g01530 725 SMART START_1 181 393 IPR002913 GO:0008289
Viun2g01530 725 SMART PH_update 5 113 IPR001849 -
Viun2g01530 725 Pfam START domain 227 374 IPR002913 GO:0008289
Viun2g01530 725 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 507 710 IPR009769 -
Viun2g01530 725 ProSiteProfiles START domain profile. 201 383 IPR002913 GO:0008289
Viun2g01530 725 MobiDBLite consensus disorder prediction 147 161 - -
Viun2g01530 725 SUPERFAMILY PH domain-like 3 120 - -
Viun2g01530 725 Gene3D - 1 120 IPR011993 -
Viun2g01530 725 Gene3D - 201 403 IPR023393 -
Viun2g01530 725 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 21 720 IPR045096 -
Viun2g01530 725 CDD PH 7 106 - -
Viun2g01530 725 CDD START 193 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01530 Viun-Chr2 25455481 25470578 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01530 - - gmx:100806401 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01530 2 25455481 25470578 Viun2g01530 2 25455481 25470578 ECH