Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01511 ATGAATCGCAACCACGACCCCAATCCGTTTGATGAGGAAGAAGTGAATCCTTTCTCGAATCGTGCACGTAGTCCACCAGTAGCATCTGAACCACTGGGCTATGGTCAAAGACATGATGCTACAGTTGACATTCCTTTGGATACTACAAATGACTCGAAGAAAAAAGGTCAGGAGCTAGCAGCTTGGGAAGCAGATTTAAAACGGAGAGAGAAGGAAATAAAAAAAAGAGAAGAGGCTGTTTCTAGAGCTGGTGTTCCTGTTGATGATAAGAATTGGCCTCCACTTTTCCCAATCATTCACCATGATATTGCAAATGAGATACCAGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGCTAGGAATTGTTCTCTGCCTTGTTTTTAATGTAGTTGCTGTAATTGTCTGTTGGATCAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTGATATATGCCCTAATGGGTGTTCCCCTTTCATATGTTCTTTGGTACAGGCCTCTCTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCATGTTCTACTTGCTTCATATTGCATTTTGCATATTTGCTGCAATCGCCCCTCCAGTTGTTTTTCATGGGAAATCATTGACGGGCATCCTTGCTGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATTTTCTATTTGATTGGATTCGGGATGTTTTGCTTGGAGGCTCTTCTAAGCTTATGGGTACTCCAGAAAATATACATGTATTTCCGAGGGCATAAGTGA 789 0.4233 MNRNHDPNPFDEEEVNPFSNRARSPPVASEPLGYGQRHDATVDIPLDTTNDSKKKGQELAAWEADLKRREKEIKKREEAVSRAGVPVDDKNWPPLFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALMGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFYLIGFGMFCLEALLSLWVLQKIYMYFRGHK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01511 262 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 261 IPR007273 GO:0015031|GO:0016020
Viun2g01511 262 MobiDBLite consensus disorder prediction 1 18 - -
Viun2g01511 262 MobiDBLite consensus disorder prediction 1 57 - -
Viun2g01511 262 Pfam SCAMP family 90 260 IPR007273 GO:0015031|GO:0016020
Viun2g01511 262 Coils Coil 59 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01511 Viun-Chr2 25345168 25352387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01511 1 262 Miscellaneous Gene Families AT1G32050 75.758 7.40e-154 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01511 K19995 - gmx:100806586 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01511 2 25345168 25352387 Viun2g01511 2 25345168 25352387 ECH