Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01498 ATGGATCAAAATAGAGAAGAGAGTTGGAGGGAATTAATGAAGAAGATGCTTCCTCCCGGTGCTTCCATACCTGATGATGCTTCTAATCTTGATTACTCCATAGCTACGGAATATGTTGGTCCACCAGTTTCATACGAATTGCCAAAAGTTGAGCCTCTTGATGGAAACTCAAGAACCATTCCCACTGCTGAGCCACTCTCTGGATCACAAAGATCAAATACTCATGTGGGGTCTATGGTGATTGAGGCAATCCCTCTGCCAGTGTCTCGTATTGCCGGTGTAACAAGGTCTCCTAATCAAAGTCCGAGGGTGTCTGGAAGCTCAGATTCTGTGGTTTCTGTCTTACAAAACCCAGATCTTTCTTCCGCTTCACCATCGGCTTCACCTGCTTCAGTTCATAATCCTCCACAGCCGGTGGTTAATGAAGTGAAGAGAGCACCGGTTGTCACTTTTAATACTGTTGATAGATCTCAGAGGAAAGAGGTGGAGGTTGTGAAGCCTGTTTATTCTGAATATGTTGGAGTTTTGAAGGAAAGGAAGAAAAAGAAAATAAGAGTTTGTTATAGGTGTGGAAAAGGGAAGTGGGAAACTAAGGAGTCTTGCATAGTGTGTAATGCCAAGTACTGCAGCAACTGTGTGCTAAGGGCAATGGGATCAATGCCTGAAGGGCGCAAATGTGTAACATGCATTGGTCAACCAATTGATGAATCAAAGCGTCTGAAACTAGGTAAATATTCAAGGGTGTTGTCCAGATTATTAAGTCCTCTGGAAGTCAAGCAAATTATGAAAGCAGAGAAAGAATGTTCGGCTAATCAGCTTCGGCCGGAGCAGCTTATCGTCAATGGGTTGCCGCTGAAGCCGGATGAGATGGCCGAATTACTTGGATGCCTGTTGCCTCCACGTAAGCTGAAACCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATAAGTTCAAACCTGAATTTCACTGGCAAGCTTAGCCTCAATGCTAGTAACGGAAACACCGAGGTTTACATGAATGGTCGAGAGATCACAAAACTTGAACTGAGGGTACTCAAGCTGGCAAATGTGCAGTGTCCTCGTGATACGCACTTTTGGGTTTATGATGATGGTCGTTACGAGGAGGAAGGTCAAAATAATATCAGAGGAAACATTTGGGAGAAGGCCTCAACAAGATTCATATGTGCCTTATTCTCTCTACCCTTTCCCCATGGTCAGCCTCATGGGCTAAAGGATGAAACTAGTCACTATACCACAGTTCCTATTTATCTGGAACAGAAAAAAACTCAGAAGCTTCTTCTTCTTGGAATACAAGGATCTGGTACTAGCACTATATTTAAGCAGGCCAAGTTTTTGTATGGGAACAAGTTTTCTGCTGAAGAGCTGCAGGATGTTAAACTGATGATCCAGAGTAACATGTATAAATATCTTAGTATTTTACTTGACGGGAGAGAGCGATTTGAAGAGGAGGCTGTTTCTAGAATGAATGGACAAGCTTCTCCTGGTCAAACTCTGGAAACAAGTAATATTTCATTCCATGGTAGCAATGGTGAAAGTAGTACTAGTGAATGCATCTATTCCCTCAACCCAAGGCTTAAACATTTCTCTGACTGGCTCCTGGACATTATAGCCACTGGGGATTTAGATGCCTTCTTCCCAGCAGCCACACGCGAATATGCACCATTAGTTGAAGAAGTATGGAAGGATCCTGCCATACAAGAAACCTTCAAAAGAAAAGATGAGCTTCACTTTCTTCCTGATGTTGCCGAGTATTTCTTAAGCCGGGCTGTGGAGATATCTAGTAATGAATACGAACCTTCTGAAAGGGACATAGTATATGCAGAAGGGGTTACTCAGGGAAATGGTTTGGCTTTCATGGAGTTTTCACTCGATGACCGTGTTCCAAAGTCAGACACTTATTCAGATAATCTGGATGCTCAGCTGCCACCACTGACCAAGTATCAACTTATAAGAGTGAATGCCAAGGGCCTTAACGAGGGCTGCAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCTGTGGTGTTTTGCGTTTCTCTAAGTGACTATGATCAGTTGTGGCTTTCCCCAGACAGCAATGGCAGTGGAACACTTGTTCAAAACAAGATGGTACAAAGCAAGGAGCTTTTCGAGACGATGGTGAGACACCCTTGCTTCAAAGACACCCCTTTGGTTCTGGTCCTCAACAAGTATGATATCTTTGAGGAAAAAATCAGCAGGGTGTCCCTGAATACATGTGAATGGTTCAGTGATTTTTGTCCCGTGCGTGCATACCATAATAACCAGTCACTGGCCCATCAGGCCTACTTCTATGTTGCTATGAAATTCAAGGACCTTTATGCATCCCTCACAGGGAAAAAACTCTTTGTGGCACAAGCCAGGGCAAGGGAACGAGTGACTGTTGATGAGGCATTCAAGTACATAAAAGAGGTCCTCAAATGGGATGAAGAGAAGGACGAAAATTTCTATGGTCCACCTGAGGATTCGTTTTACAGCACAACAGACATAAGCTCCTCTCCCTTTGTCAGACAATAG 2589 0.4361 MDQNREESWRELMKKMLPPGASIPDDASNLDYSIATEYVGPPVSYELPKVEPLDGNSRTIPTAEPLSGSQRSNTHVGSMVIEAIPLPVSRIAGVTRSPNQSPRVSGSSDSVVSVLQNPDLSSASPSASPASVHNPPQPVVNEVKRAPVVTFNTVDRSQRKEVEVVKPVYSEYVGVLKERKKKKIRVCYRCGKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGKYSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGLPLKPDEMAELLGCLLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSLNASNGNTEVYMNGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFICALFSLPFPHGQPHGLKDETSHYTTVPIYLEQKKTQKLLLLGIQGSGTSTIFKQAKFLYGNKFSAEELQDVKLMIQSNMYKYLSILLDGRERFEEEAVSRMNGQASPGQTLETSNISFHGSNGESSTSECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDIVYAEGVTQGNGLAFMEFSLDDRVPKSDTYSDNLDAQLPPLTKYQLIRVNAKGLNEGCKWVEMFEDVRAVVFCVSLSDYDQLWLSPDSNGSGTLVQNKMVQSKELFETMVRHPCFKDTPLVLVLNKYDIFEEKISRVSLNTCEWFSDFCPVRAYHNNQSLAHQAYFYVAMKFKDLYASLTGKKLFVAQARARERVTVDEAFKYIKEVLKWDEEKDENFYGPPEDSFYSTTDISSSPFVRQ 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01498 862 Gene3D - 644 840 IPR027417 -
Viun2g01498 862 MobiDBLite consensus disorder prediction 117 135 - -
Viun2g01498 862 MobiDBLite consensus disorder prediction 93 112 - -
Viun2g01498 862 ProSiteProfiles G-alpha domain profile. 440 841 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 Pfam G-protein alpha subunit 438 829 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 837 IPR027417 -
Viun2g01498 862 MobiDBLite consensus disorder prediction 117 138 - -
Viun2g01498 862 Gene3D - 471 627 IPR011025 GO:0007165
Viun2g01498 862 FunFam Extra-large guanine nucleotide-binding protein 3 471 627 - -
Viun2g01498 862 CDD G-alpha 442 833 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 217 833 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 PRINTS Alpha G protein (transducin) signature 616 638 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 PRINTS Alpha G protein (transducin) signature 443 458 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 PRINTS Alpha G protein (transducin) signature 742 751 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 PRINTS Alpha G protein (transducin) signature 689 717 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 SMART galpha_1 423 819 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g01498 862 MobiDBLite consensus disorder prediction 52 73 - -
Viun2g01498 862 MobiDBLite consensus disorder prediction 839 862 - -
Viun2g01498 862 SUPERFAMILY Transducin (alpha subunit), insertion domain 469 626 IPR011025 GO:0007165
Viun2g01498 862 MobiDBLite consensus disorder prediction 845 862 - -
Viun2g01498 862 FunFam Extra-large guanine nucleotide-binding protein 3 641 839 - -
Viun2g01498 862 SUPERFAMILY FYVE/PHD zinc finger 161 230 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01498 Viun-Chr2 25268461 25274465 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01498 - - gmx:100794534 1609.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01498 2 25268461 25274465 Viun2g01498 2 25268461 25274465 ECH