Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01468 ATGAGCATGACCGGTTCTTCAGCTTACTGTGTGGCACAAGCCTTCCCTCCCTTCTTCCGCCTCTCTAACAAAACTATGTTCCTCCTCTCCACGCCGCCAACCACATTCTTCCCTACGCCTACAACTCCTAGGGTTCCGCTTCTTTCTTCAACCGCCTCCTCCTCCTCCACCGCCTCCTCTTCCTCCTCCTCCATCTCCCTGCGATCTTCTACCGCGCCCTCGCCCTCCTGCTCCTCCGTTACTCCTAAAGACAACTCTCTCGTCTCCGCCAAACATTCTCACCCTAACATGTCCGCCTCCGTCTCTTCCCGGACCTTCCTCAACGCTCGGAGCGAACAAGACGTTTTTGCTGGAATCAAGAAAGAAGTAGAAGCTGGATCTCTTCCTGCCAATGTTGCTGCAGGAATGCAAGAAGTTTACAATAACTATAAAAGTGCAGTTATCCAAAGTGGAGATCCCAAGGCAAATGAGATTGTACTGTCAAATATGATTGCTTTATTAGATCGAGTATTTTTGGATGTGACGGATCCTTTTGTTTTTCAACCACACCACAAGGCAAAGAGAGAGCCTTTTGACTACTACGTGTTTGGGCAGAATTACATCCGTCCTTTAGTTGATTTCAAAAATTCTTATGTTGGCAACATGCCCCTTTTCATTGAAATGGAAGAGAAACTTAAGCAGGGACACAACATCATCTTGATGTCAAATCACCAAACTGAAGCTGATCCAGCCATCATTGCATTGCTTCTTGAAACACGACTCCCATATATAGCTGAAAACCTGACCTATGTTGCAGGAGATAGAGTTATAACTGATCCTCTGTCCAAACCATTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCAGCACTTGTAGAGACGAAAAGAACTGCAAACATACGAGCTCTGAAGGAAATGGCTATGCTTTTAAGGAATGGATCACAAATAGTCTGGATTGCCCCTAGCGGTGGTAGGGATCGCCCAGATGCCCAGACCAGAGAATGGGTGCCGGCACCCTTTGATATTTCTTCGGTAGATAATATGCGAAGACTTGTTGAACATTCAGGTCCACCAGGTCATGTATATCCTTTGGCGATATTATGCCATGATATAATGCCCCCTCCGCTAAAGGTCGAGAAAGAAATTGGGGAGAAAAGAATTATATCCTTTCATGGGGCTGGCATATCAGTGGCTCCAGCGATAAGCTTTTCTGAAGCCACTGCTACTTGTGAAAATCCTGAAAATGCTAAGGACGTTTTCACAAAAGCCCTGTACGATTCTGTGACTGAGCAATATAATGTGCTGAAATCTGCTATACATGGAAAAAAAGGATTTGAAGCATCAACTCCTGTAGTTTCTTTGTCACAGCCATGGAAGTAG 1404 0.4516 MSMTGSSAYCVAQAFPPFFRLSNKTMFLLSTPPTTFFPTPTTPRVPLLSSTASSSSTASSSSSSISLRSSTAPSPSCSSVTPKDNSLVSAKHSHPNMSASVSSRTFLNARSEQDVFAGIKKEVEAGSLPANVAAGMQEVYNNYKSAVIQSGDPKANEIVLSNMIALLDRVFLDVTDPFVFQPHHKAKREPFDYYVFGQNYIRPLVDFKNSYVGNMPLFIEMEEKLKQGHNIILMSNHQTEADPAIIALLLETRLPYIAENLTYVAGDRVITDPLSKPFSIGRNLICVYSKKHMLDDPALVETKRTANIRALKEMAMLLRNGSQIVWIAPSGGRDRPDAQTREWVPAPFDISSVDNMRRLVEHSGPPGHVYPLAILCHDIMPPPLKVEKEIGEKRIISFHGAGISVAPAISFSEATATCENPENAKDVFTKALYDSVTEQYNVLKSAIHGKKGFEASTPVVSLSQPWK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01468 467 Gene3D - 101 176 IPR038114 -
Viun2g01468 467 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 103 466 - -
Viun2g01468 467 Gene3D - 177 458 - -
Viun2g01468 467 Pfam Acyltransferase 219 374 IPR002123 GO:0016746
Viun2g01468 467 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 43 467 IPR016222 GO:0004366|GO:0006650
Viun2g01468 467 SMART plsc_2 231 377 IPR002123 GO:0016746
Viun2g01468 467 Pfam Glycerol-3-phosphate acyltransferase N-terminal 103 178 IPR023083 GO:0004366
Viun2g01468 467 MobiDBLite consensus disorder prediction 47 102 - -
Viun2g01468 467 PIRSF G3POAT 3 467 IPR016222 GO:0004366|GO:0006650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01468 Viun-Chr2 25040068 25048711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01468 103 466 Acyl Lipid Metabolism Gene Families AT1G32200 67.857 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01468 K00630 - gmx:100789434 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01468 2 25040068 25048711 Viun2g01468 2 25040068 25048711 ECH