Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01450 ATGGAAGTGAAAACTGCAAAGGCATTGGATAGGATTGCACTCAAATTGAAGAGAAAGCGACCTTCCCAATATGCTGCACAGGTATGTGGAGCTTTGCAGCCTTCAGGCAGGATGGTAAAACAGATAAAATTGGGTGAATATAGAAAAAAACGTGCAAATGCTGGTTCTCATGTTGGGAAGTCCTTGAGTAACCGGTTTTTAAGTTATAAAAAAAGTGGGAAACCGGCTCGTCTGATGTTCTATAAGAATGGTGAGTGGGTGGATTTTCCAAGGGATATTCTTGACTTGGTTAAGAAAGATCTTGAAATCAAGAAGTCGGTTGTGGAGGTGGAGTTAAATGGGTATCATATGGTGTTAAATTTTTTCCATATGTATAAGTTGAATATGAAAACTGGTCTGCAACAACCAATGGCTTGGATTGACGAGGCAGGAGGCTGCTTTTTCCCTGAGGTCTATGCTGCTTATAGTGAAGAGCCTTATACTCTCTGCAAACAGGGCACTGGAAAAAGTACAGAGTCATATAATTCTAATGAAGTAAAATTACAATTAGAAATTGAAATAAACGGACTGGATCAGTGGAAGTTGAGGGAGTGTTCTGACGAGTCCAATTCCTTATTTAACGGTATTAGAATTGATAGTAAACAAAAAAGCTGTCCATATGATGTAGAAGTAGAAAATAGCATTAACAAAGAGAACTATGGAAATGTTGACGAATCTATACAGCAAAATCAAGAAATAGATTTAGAAGCTTATACTGAATCTGTATGTGGAAAGTTGAATTTCGATTCTGTACAGAAGATTTTTCTTAAGGGAATGAACAATAATGGCATTACTGATTCTAACATTGTTGGAATTGACCGGTGCTCTGGTGCGGCAATGCAAGCACGATTGGAGCTATTCTTGAAGCAAGCTGAAATTACAAAAAAATGTCATGGGGAGGCTAATGTTCAGTATGCCTGGCTTGCTTCTACTAAACGAGAACTGTATACAATGATGGAGTATGGGCTTGGCCACTGTAGACTATCTGCATCTAAAGGCTCATATGGCACTGGTGTTCATCTTGCAGCTGTTACCTGCCCTGACACCAGTGCACGTTATTGTGATGTTGACGAAAATGGGGTTCGGCATTTGGTCCTTTGTCGTGTAATAATGGGAAACATGGAGATTCTCCGTCCCGGCACTGGTCAGTTCCAGCCCAGTAGCTATGAATATGATAATGGGGTGGATGACATTCAATGTCCGAGATATTATGTGGTGTGGAATATGAACATTAACACCCACATCTATCCAGAATTTGTTGTTAGCTTCAAGCTGTCTTTTGATGCTGAAGGTCTTTCTTGTGGAAGTGAAAGGAAGAATGATGTTTCTGGGGTTATGACAGCCTGCCATGGTCCTCAAGGACTGTTACCTTCTTGTGCAGAAGTCAAGGGAACAGCTCCCTCAAGAGGTCCAACATCGCCTTGGATGTCTTTTCCTTTGCTTTTTGCTGCTATCAGAAACAAGGTTCCTCCTAATGATATGGAACGTGTCAAAAAACATTATGAACAATTCAGGTCAAAGCAGATATCCCGGAATGATTTTGTGAAGATGCTGAGGTTAATAGTTGGAGATGCTCTATTGAAACTTGCAATGGCAGAACATCAATTTAATATACCATCCTATGTTAAGGAAGGCTAA 1677 0.4013 MEVKTAKALDRIALKLKRKRPSQYAAQVCGALQPSGRMVKQIKLGEYRKKRANAGSHVGKSLSNRFLSYKKSGKPARLMFYKNGEWVDFPRDILDLVKKDLEIKKSVVEVELNGYHMVLNFFHMYKLNMKTGLQQPMAWIDEAGGCFFPEVYAAYSEEPYTLCKQGTGKSTESYNSNEVKLQLEIEINGLDQWKLRECSDESNSLFNGIRIDSKQKSCPYDVEVENSINKENYGNVDESIQQNQEIDLEAYTESVCGKLNFDSVQKIFLKGMNNNGITDSNIVGIDRCSGAAMQARLELFLKQAEITKKCHGEANVQYAWLASTKRELYTMMEYGLGHCRLSASKGSYGTGVHLAAVTCPDTSARYCDVDENGVRHLVLCRVIMGNMEILRPGTGQFQPSSYEYDNGVDDIQCPRYYVVWNMNINTHIYPEFVVSFKLSFDAEGLSCGSERKNDVSGVMTACHGPQGLLPSCAEVKGTAPSRGPTSPWMSFPLLFAAIRNKVPPNDMERVKKHYEQFRSKQISRNDFVKMLRLIVGDALLKLAMAEHQFNIPSYVKEG 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01450 558 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 51 544 IPR044964 -
Viun2g01450 558 Gene3D - 239 439 - -
Viun2g01450 558 SUPERFAMILY ADP-ribosylation 261 438 - -
Viun2g01450 558 Pfam RCD1-SRO-TAF4 (RST) plant domain 484 548 IPR022003 -
Viun2g01450 558 ProSiteProfiles PARP catalytic domain profile. 237 456 IPR012317 GO:0003950
Viun2g01450 558 ProSiteProfiles RST domain profile. 482 553 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01450 Viun-Chr2 24909555 24915106 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01450 - - gmx:100800707 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01450 2 24909555 24915106 Viun2g01450 2 24909555 24915106 ECH