Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01445 ATGTCGATAAAAACAGTCAAAGTCGTTAATGTTTCCTTGGGAGCAACTGAACAAGACATTGAGGAGTTCTTTTCATTTTCTGGTAAAATTGAATATGTTGAACTACGGAGCCATGATGAAAAATCTCAAACTGCTTATATTACCTTCAAGGAACCGCAGGGAGCTGAGACTGCTGTACTGCTTTCGGGAGCAACGATAGTGGATATGTCAGTTACAATAACTCTGGATCCAGATTACCAGCTTCCACCGGATGCCCTTATATCATCTGAACAGGACAATGAAACTCCTGGTGGTGCTGAAGTTGCTTTACGGAAGGCAGAGGATGTGGTCTCTGGCATGCTAGCCAAGGGCTTTATCTTAGGGAAAGATGCTGTCAACCAAGCAAAAGCTTTTGACGAAAAGCATCAGTTATCGTCCACAGCCTCAGCAAAAGTTGCATCTTTTGATCAGAAAATTGGGCTTAGTGAGAAAATAAGTGCTGGTGCTACAGTTGTGGGTGATAGAGTTCGAGATGTGGATCAAAAATTTCAGGTTTCAGAAAAGACCAAATCAGCTTTTGCAGCTGCAGAACAGACAGTGAGCAATGCTGGTTCTGCCATAATGAAGAATCGCTATGTACTTACTGGGGCATCCTGGGTCACAGGTGCTTTTAGTAGGGTTTCTAAGGCCGCTGGGGAAGTAGGACAGAAGACTAGAGAGAAAGTGGAGAGTGAAGAACAGAAACGAAGTGTGGAAGATCAGCAAGCACGGGTCCTTTCTGAGGCACCCAAAGCACCAGAAGCAAGTGAACAGAAGCCTTCTAAGCCTGCTCCTGCTCCTGCTATGGGTTTGATCCTTTGA 840 0.4476 MSIKTVKVVNVSLGATEQDIEEFFSFSGKIEYVELRSHDEKSQTAYITFKEPQGAETAVLLSGATIVDMSVTITLDPDYQLPPDALISSEQDNETPGGAEVALRKAEDVVSGMLAKGFILGKDAVNQAKAFDEKHQLSSTASAKVASFDQKIGLSEKISAGATVVGDRVRDVDQKFQVSEKTKSAFAAAEQTVSNAGSAIMKNRYVLTGASWVTGAFSRVSKAAGEVGQKTREKVESEEQKRSVEDQQARVLSEAPKAPEASEQKPSKPAPAPAMGLIL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01445 279 FunFam RNA recognition motif-containing protein 1 74 - -
Viun2g01445 279 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Viun2g01445 279 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Viun2g01445 279 MobiDBLite consensus disorder prediction 230 248 - -
Viun2g01445 279 Gene3D - 2 74 IPR012677 -
Viun2g01445 279 SMART rrm1_1 5 74 IPR000504 GO:0003723
Viun2g01445 279 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Viun2g01445 279 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 240 - -
Viun2g01445 279 MobiDBLite consensus disorder prediction 230 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01445 Viun-Chr2 24881213 24884702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01445 - - gmx:100809613 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01445 2 24881213 24884702 Viun2g01445 2 24881213 24884702 ECH