LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun2g01428	ATGGCAGAGGAAAAACTATTCCGAGTAGGGTACGCTTTGTTGCTGAAGAAGCAAAGCAGCTTCATCCGAGACTCGCTCGTGAATCTTGCAAGATCCCGCGGAATAGACCTGGTCCGGATCGACCCAAACCGGAACCTAACGGATCAAGGTCCGTTTGATTGCGTCCTCCACAAACTCTACGATGACGATTGGAGGAATCAACTGAACGAGTTTACCGCGAATTATCCTAATGCCGTCGTTCTTGATTCTCCGGAATCGATCGAGAGGCTCCACAACCGGATTTCGATGCTGCAGGTCGTGTCGGAGTTGAAAATCGACGACCGGACCGAGACTGTCGGGATTCCGAAGCAGATTGTGATAAACGACAAGGCGAAGCTGTTCGACCGGCGGATCTGGAAGGCTTTGAAGTCTCCGGTGATCGCAAAACCTCTGGTGGCCGACGGCAGCGCGAAGTCGCACAAAATGGCGCTGGTTTACAACCACGAAGGTTTGAATTCTCTGAAGCCTCCTGTGGTGGTGCAGGAGTTCGTGAACCACGGTGGCGTGATCTTCAAGGTGTACGTGGTCGGGGAGCGCGTGAGGTGCGTGAAGCGGAAGTCGCTGCCGGACGTGGGAGAGGAGGAGATGATGAAGGTTTCGGAGGATTTGTGGGCGTTTTCACAGTTTTCAAACTTGGCAAGCGATGAAAGAACCGACGATAAATATTACAAGATGATGCATTTGGATGATGCTGTGATGCCTCCTCTGAGCTTCGTTACTCAGATAGCTCTAGAGTTGAGGCGTGTGATGAAGCTGAACCTGTTTAATTTCGATGTTATTAGGGATTCTCGACGCAAAAATCGTTATCTTATTGTTGATATCAATTACTTCCCAGGCTATGCGAAGATGCCTGGTTATGAGACTGTTTTTACTGAGTTTTTGTGTGATTTGTTGTGCAAGAAACAGCAAGGGGGTGAGACTGAGGAGTGTGACAAAGATGCAACGAGGATCGTGAGCAATACTTGTAGTGAGGATGGGGAAGATAAAGAGGGTTCTGGATAA	1041	0.4938	MAEEKLFRVGYALLLKKQSSFIRDSLVNLARSRGIDLVRIDPNRNLTDQGPFDCVLHKLYDDDWRNQLNEFTANYPNAVVLDSPESIERLHNRISMLQVVSELKIDDRTETVGIPKQIVINDKAKLFDRRIWKALKSPVIAKPLVADGSAKSHKMALVYNHEGLNSLKPPVVVQEFVNHGGVIFKVYVVGERVRCVKRKSLPDVGEEEMMKVSEDLWAFSQFSNLASDERTDDKYYKMMHLDDAVMPPLSFVTQIALELRRVMKLNLFNFDVIRDSRRKNRYLIVDINYFPGYAKMPGYETVFTEFLCDLLCKKQQGGETEECDKDATRIVSNTCSEDGEDKEGSG	346

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun2g01428	346	FunFam	Inositol-tetrakisphosphate 1-kinase	117	216	-	-
	Viun2g01428	346	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain	8	87	IPR041429	-
	Viun2g01428	346	PIRSF	ITPK	1	323	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Viun2g01428	346	PANTHER	INOSITOL-TETRAKISPHOSPHATE 1-KINASE	3	315	IPR008656	GO:0000287\|GO:0005524\|GO:0032957\|GO:0047325\|GO:0052725\|GO:0052726
	Viun2g01428	346	SUPERFAMILY	Glutathione synthetase ATP-binding domain-like	82	294	-	-
	Viun2g01428	346	Gene3D	-	84	292	-	-
	Viun2g01428	346	FunFam	Inositol-tetrakisphosphate 1-kinase	83	292	-	-
	Viun2g01428	346	Pfam	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain	108	308	IPR040464	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun2g01428	Viun-Chr2	24774216	24775612	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun2g01428	K00913		-	gmx:100794373	545.814

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun2g01428	2	24774216	24775612	Viun2g01428	2	24774216	24775612	ECH
	Viun2g01428	2	24774216	24775612	Viun3g03095	3	37220130	37221900	PCT