Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01262 ATGGCAGCTGCAGAAGAAGCACCCATTCACGGTGATATCCTAGAAGCAATACTATCGCACGTGCCACTCATCCACCTCGTGCCAATCTGTCACGTGTCAAACTCCTGGAAGCGTGCGGTCTCCTCCTCTCTCGCACATCTCCGCCCCATTAAGCCATGGCTCATCGTCCTCACTCAGAGCCCACGCGCCTCGCACGTGACAAAGCTGCACGCTTACGACCCTCGCTCCGACGTGTGGCTCGAGATTAAAAACCACATGTGTCCTCACTCCTCTACCGTGCGCTCCTCGCACTCCTCGCTACTCTACACGCTCACCCCCGCCGAGTTCGCCTTCTCCCTCGACGCGCTGCACCTCAACTGGCACCACGCGCCCTCACCGCGAGTGTGGCGCACCGACCCCATCGTGGCTCGCGTGGGCTCGCGCGTGGTGGTGGCCGGCGGCGCGTGCGAGTTCGAGGACGACCCGCTCGCGGTGGAGATGTACGACGTGGAGAGCCGCGCCTGGGAGACGTGCCCCTCCATGCCGGCGCTGCTGAAGGATTCCACGGCGTCGTCGTGGCTTTCGGTAGCTGTCACCGGAGAGGTTATGCACTTGACGGAGAAACACTCGGGCGTGACATACTCGTTCGACACTGTGTCGAAAAAATGGGAGGGACCGTTTGACTTGAGACCTGATGAGAGTGTTTTTAACTGCGTCACAGGAACACTAGGGGAGCGGTTGATGGTGGCGGGGGTGGTGGGGGAATTTGGGAACGTGAGAGGCGTGAAGCTGTGGGAGGTTCGGGGTGGGTTAGGGTCCAGAATGGTGGAAGTGGGTGAGATGCCGAAGGAGATGGTTTGGAAGGTGATGGGTGATTCGGAGTTAGGTTCGGTGGAGGTGACGTGGATTGGGGACTTTGTTTACGCGAGGAACACTTCCGTTCCGGAGGAATTGGTGGCGTGTGAGGTAGTGAACGGTGTCGGGTGCGAGTGGAGAAGTGTACGGAACGGTGCCGTGAGCCACGGCGCGAGAATGGTGGCTTGCGGCGGCAATGTGTGCATGGAGGATCTGCAGCGTGCGGTGATGTCGGGGACACGGACATTTTGCGTGAAACACATGTGA 1101 0.5995 MAAAEEAPIHGDILEAILSHVPLIHLVPICHVSNSWKRAVSSSLAHLRPIKPWLIVLTQSPRASHVTKLHAYDPRSDVWLEIKNHMCPHSSTVRSSHSSLLYTLTPAEFAFSLDALHLNWHHAPSPRVWRTDPIVARVGSRVVVAGGACEFEDDPLAVEMYDVESRAWETCPSMPALLKDSTASSWLSVAVTGEVMHLTEKHSGVTYSFDTVSKKWEGPFDLRPDESVFNCVTGTLGERLMVAGVVGEFGNVRGVKLWEVRGGLGSRMVEVGEMPKEMVWKVMGDSELGSVEVTWIGDFVYARNTSVPEELVACEVVNGVGCEWRSVRNGAVSHGARMVACGGNVCMEDLQRAVMSGTRTFCVKHM 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01262 366 Pfam F-box domain 12 46 IPR001810 GO:0005515
Viun2g01262 366 SUPERFAMILY Kelch motif 52 263 IPR015915 GO:0005515
Viun2g01262 366 Gene3D - 33 263 IPR015915 GO:0005515
Viun2g01262 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 10 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01262 Viun-Chr2 23131610 23133274 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01262 - - gmx:100805691 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01262 2 23131610 23133274 Viun2g01262 2 23131610 23133274 ECH