Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01229 ATGTACAAAGGGTCTGATGAAAAACAGTATGTAAGTAATAGGAAGAAGGTTAGAAACTGTGATGTTGCAGAGAGCAGTTTTCAAAGCATGAGTGTTGATGATGTGGATCCATCTGGGGGTTCATCATTCCAATTAAGAAATTTGAGTTGCTGCTCATTGGTTTGTAAACCAAGTGCTTCTAACATAGCCAACAGATACTTCATGCTTCACAAAGTAACTCAGTCCTGGCCTTCCCCTGCCTTGTGTTTTGTGGAGAAAGTGCCTCAAGATGCACAAAGTTCTCATGTTACAGTTTTTAATTCAGGTGATGGATCCTCAAAATCAGATAATGAGTCAACCTCATCTAAGAGCATGCGGGATGTTCATATTTCAATGCGGTTGATGGAGGACTTTCTAGATCTTGCTAAAGAAAATACAGAAAAAGATTTGGAAACTTGTGGTATACTTGGTGCCTATCTTGAGAAGGGAACCCTTTATATGACTACTCTGATTATACCAAAGCAGGAATCTGCTTCGAATTCTTGTCAAGCTACAAATGAGGAGGAAGTTTTCAAAATTCTAAATGAAAGATCCCTTTATCCTGTTGGATGGATTCATACTCATCCTTCTCAAAGTTGTTTCATGTCATCTGTCGATCTTCACACTCAATATTCCTACCAGATGATGATTCCTGAGGCATTTGCCATTGTCTTGGCACCAAATGATAAATTAAGGAGCTGTGGATTATTTCGTATAGCCGACCCTGAAGGAATGAGTATTCTGAAAAATTGCAAGGAGACAGGATTTCATCCACACAAAGAACCAGATAATGGCAACCCTGTGTATGAGCACTGCTCCAATGTGTACAGAAACTCTAATCTAAGGTTTGAAATCTTTGATTTGCGATAA 888 0.3896 MYKGSDEKQYVSNRKKVRNCDVAESSFQSMSVDDVDPSGGSSFQLRNLSCCSLVCKPSASNIANRYFMLHKVTQSWPSPALCFVEKVPQDAQSSHVTVFNSGDGSSKSDNESTSSKSMRDVHISMRLMEDFLDLAKENTEKDLETCGILGAYLEKGTLYMTTLIIPKQESASNSCQATNEEEVFKILNERSLYPVGWIHTHPSQSCFMSSVDLHTQYSYQMMIPEAFAIVLAPNDKLRSCGLFRIADPEGMSILKNCKETGFHPHKEPDNGNPVYEHCSNVYRNSNLRFEIFDLR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01229 295 ProSiteProfiles MPN domain profile. 121 251 IPR037518 -
Viun2g01229 295 MobiDBLite consensus disorder prediction 94 118 - -
Viun2g01229 295 FunFam AMSH-like ubiquitin thioesterase 2 101 295 - -
Viun2g01229 295 SUPERFAMILY JAB1/MPN domain 121 250 - -
Viun2g01229 295 CDD MPN_AMSH_like 119 295 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Viun2g01229 295 PANTHER AMSH-LIKE PROTEASE 14 295 - -
Viun2g01229 295 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 117 225 IPR000555 GO:0005515|GO:0008233|GO:0008237
Viun2g01229 295 SMART pad1_6 120 248 IPR000555 GO:0005515|GO:0008233|GO:0008237
Viun2g01229 295 Gene3D Cytidine Deaminase, domain 2 98 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01229 Viun-Chr2 22973445 22977679 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01229 K11866 - gmx:100807282 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01229 2 22973445 22977679 Viun2g01229 2 22973445 22977679 ECH