Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01137 ATGTCCGATCATTCGAGGGGTCGCGTTACCATCACTCTAGGGCGTAGTGGTCAGGTTGTGAAGAGGGATGTATCTTCTGTGGATGTTTCTTCTTTCTCTTCTCTTCCCTCAGCTGGCACTAAGCGGTCTGTAAGAGACAGGATTGGAAACAATGCAGATGGTTCTGTGTGGCACGGAAATGGACTTGGTGGCAATAAACGACAGCGAGGAGATGTAAGCATACAAAATGGACTGGATGGCAATGATCTTCGGTTGAAGCTCATGCAAAAAAGTGCATCTAGGCATGCTGACAGCAATGGTAGTAAGAGGCATATGGATCTCCGTGAAAAACTTTCAAAGACAACTCACTCTCTGTCAAATAGTTTTAGTTCAAAGCAGCGTATGCCAGAATCAAGGGAAACAAGTTTGTTGAGGCAAATTCCCTCCGCTAGAAGTTCTGATGATTTAATGCGCATGGAATCCATGAGAAGCTCGTACTCTCCTTGGACATTGGATCATATAAGGAGAAGATCACCAGATGGGTTTCCGAGTACTTCAAGGGGTATTTCCCCTCAAAGGGACGTCCAAGACCTACAGAGAAGAAGGCCATTAAACAGGACATATGATGGCGTCAGACCAGTTCCATATGTAAGTAGGGATGTTCTTGAAACTTCGAGGCCTCCAGTAAGTACACCCCAATCTTTCATGTCACGCTCTACAATGTCCACATTGCCTCCAGTAACTGCCAAGCCTGTAGCATCTCATGCTGGCCAACTTCCTCCATCAAGCAGTGTTGCCCAAAGGTCATCATATGTGGGTGATGAACAAGTACAACAACCAAACCAGACTGTGGATGGCCTGTTACATGCACTAGGACTTCAAAAATATGCCATTCTCTTTAAGGCAGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGATCTCAAAGAGCTAGGGATTCCTATGGGTCCAAGGAAAAAAATTCTTCTCGCTCTCTTGCCCCGTACCAAGCGTCAACAATGA 1011 0.456 MSDHSRGRVTITLGRSGQVVKRDVSSVDVSSFSSLPSAGTKRSVRDRIGNNADGSVWHGNGLGGNKRQRGDVSIQNGLDGNDLRLKLMQKSASRHADSNGSKRHMDLREKLSKTTHSLSNSFSSKQRMPESRETSLLRQIPSARSSDDLMRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDVQDLQRRRPLNRTYDGVRPVPYVSRDVLETSRPPVSTPQSFMSRSTMSTLPPVTAKPVASHAGQLPPSSSVAQRSSYVGDEQVQQPNQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01137 336 ProSiteProfiles SAM domain profile. 272 335 IPR001660 GO:0005515
Viun2g01137 336 MobiDBLite consensus disorder prediction 250 269 - -
Viun2g01137 336 MobiDBLite consensus disorder prediction 244 269 - -
Viun2g01137 336 SUPERFAMILY SAM/Pointed domain 274 328 IPR013761 -
Viun2g01137 336 MobiDBLite consensus disorder prediction 217 236 - -
Viun2g01137 336 Gene3D - 274 336 IPR013761 -
Viun2g01137 336 Pfam SAM domain (Sterile alpha motif) 273 328 IPR001660 GO:0005515
Viun2g01137 336 MobiDBLite consensus disorder prediction 170 190 - -
Viun2g01137 336 FunFam DDHD domain-containing 2 275 336 - -
Viun2g01137 336 PANTHER SCP160 81 332 - -
Viun2g01137 336 MobiDBLite consensus disorder prediction 24 77 - -
Viun2g01137 336 MobiDBLite consensus disorder prediction 110 152 - -
Viun2g01137 336 SMART SAM_4 269 334 IPR001660 GO:0005515
Viun2g01137 336 MobiDBLite consensus disorder prediction 114 142 - -
Viun2g01137 336 MobiDBLite consensus disorder prediction 24 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01137 Viun-Chr2 22255951 22264507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01137 233 328 Glycosyltransferase AT3G07170 44.118 8.11e-18 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01137 - - gmx:100797199 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01137 2 22255951 22264507 Viun2g01137 2 22255951 22264507 ECH