Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01130 ATGAACGGGATGGAGTGCGCGGGGAAAGGGAGCGGAGCACGGTGCGGCGGTGCCGCCACGCGTCTCTGCGCTCGCTGTGAAGCCGTCGCTTATTGCTCTCTCTCTCACCAGATTGCACACTGGAGTCGTCACAAACACGAGTGTGATAGGTTGCAACAGCAGATGAAGAGTGTTGAAGTCCTCAACGATTTTCCCTTCACTTTCTCTCGCGAAGCCACGTTTCAGGTTTGTGTGAAGCAAGAAGGTAGGTGTTCATTTTTGAGCAACAGAGGTCTTCATGAAGTGGGAATGTGGATGCATGAATGCGGTTGTGGGGCGTCATCTGCTTCATTTGATCGTTTAAGGTTAAATAATGGTTGGGATCTCCCAAGTGTTTTATGTCCATGTGGACCTGAGAAAGAGCTGCTACAACTTGCTGTGTTTGGAGAATTACTGGCACTCTTCCCTGGTGTACATATTCATATAGAACTTGTTGGACCTGCAATTCCTCCTCAGAGGGATGGTGAGAAAATTCACATTTCCAAGTATGCTTGTTGCAATGAAGATGAGTGTGAGTGCAAAATAGCAATTGAAAATACATTTCCTGGAACGAAGTTTGGTTCAGCAGTGACATTGCAGCTTTGGCGAGGATTCTATCATGACCGGTGTAGAGATATTGTTAAGGATTCCTTCCCTCACCTAATAATTGCTCCAAATGGTGGCATTGCTGCTTATTCCAGTTGGTTACCGAGTATTGAGTTAATTGAAAAGATTGGCGTCCCAGCTGTTTTTACTGATTATTGCGAGGAAGCATGTCATCTTGCAGCAAGTTGTATTAAGACTGTGTCTGACCGTCCTCTTAAGTTGCCAGTTCAGTTAAATCCTTTCAGGCAGCCCATAGCCGTGGAAGACAGCGTGCTGTTGCTTCCCTGTTACTCGAATTGCTTTCTTTTTGGGATGTAA 942 0.4607 MNGMECAGKGSGARCGGAATRLCARCEAVAYCSLSHQIAHWSRHKHECDRLQQQMKSVEVLNDFPFTFSREATFQVCVKQEGRCSFLSNRGLHEVGMWMHECGCGASSASFDRLRLNNGWDLPSVLCPCGPEKELLQLAVFGELLALFPGVHIHIELVGPAIPPQRDGEKIHISKYACCNEDECECKIAIENTFPGTKFGSAVTLQLWRGFYHDRCRDIVKDSFPHLIIAPNGGIAAYSSWLPSIELIEKIGVPAVFTDYCEEACHLAASCIKTVSDRPLKLPVQLNPFRQPIAVEDSVLLLPCYSNCFLFGM 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01130 313 Gene3D - 5 55 - -
Viun2g01130 313 Pfam MSS51 C-terminal domain 124 297 IPR046824 -
Viun2g01130 313 Pfam MYND finger 13 48 IPR002893 -
Viun2g01130 313 ProSiteProfiles Zinc finger MYND-type profile. 12 48 IPR002893 -
Viun2g01130 313 PANTHER ZINC ION BINDING PROTEIN 130 313 - -
Viun2g01130 313 SUPERFAMILY HIT/MYND zinc finger-like 14 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01130 Viun-Chr2 22124780 22129042 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01130 K24081 - sly:101243992 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01130 2 22124780 22129042 Viun2g01130 2 22124780 22129042 ECH