Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01123 ATGCTTCCCCTTCGCCTGAGCGCCGTCGTTTCTTCCCTCATTCTCTGCTTCCTCTTCCCCCCGTTCTTCTGTCTCGGAATCCGCTCTTTTCCGACCGCCGAGGACGGCGGCGCGTTCTTCCACTACGCGGAGGCACCGGAGTACCGAAATGGGGCGGGCTGCCCAGCTCCCTCAACCCACACCGCTATCCCCTCGTGCGACCCGTCTCTGGTCCACATCGCCATGACCCTCGACTCCGGCTACCTCCGCGGCTCCATCGCCGCCGTGCACTCCGTTCTCCGCCACTCCTCGTGCCCGGAAAGCGTGTTCTTCCACTTCGTCGCGGCGGAGTTCGACCCGGCAAGCCCGCGGGTCCTGACCCGTCTCGTTCGGTCCATCTTCCCTTCTTTGAACTTCAAAGTCTACATCTTTAGAGAAGACACGGTGATTAACCTAATCTCGTCTTCAATCAGACTGGCCTTGGAAAACCCGTTGAACTACGCGCGCAACTACCTCGGCGACATGCTGGACGCGTGCGTGGACCGCGTGATCTACCTGGACTCCGACGTGGTGGTGGTCGACGACGTGAGGAAGCTGTGGCGCGTGCCGCTCACGGACGCGCGCGTGATCGGTGCGCCGGAGTATTGCCACGCGAACTTCACGAAGTACTTCACCGAGGAGTTCTGGAACGACCCTTTACTCTCTCGCGTGTTCTCTTCTCGAAAGCCTTGTTATTTCAACACTGGGGTGATGGTGATGGATTTGGTGCGGTGGAGGGAGGGGAACTACAGGAAGAGGATTGAGAACTGGATGGAACTGCAGAGGAAAAAGAGGATTTATGATTTGGGTTCTCTGCCTCCTTTTTTGCTTGTTTTTGCAGGGAATGTTGAAGCCATTGATCATAGATGGAACCAGCATGGGCTTGGTGGGGACAACGTTAATGGGGTGTGCAGGTCTCTGCATCCCGGTCCTGTTAGTTTGTTACATTGGAGTGGAAAGGGGAAGCCATGGGTGAGGCTTGATGAGAAGAAACCATGTCCTTTGGATCGTCTTTGGGAGCCTTATGATTTGTACAAACCCAAACAAACGAGGGATAGGGTGAGAGATCAGAACTGGGGGTTCTCTTCTTCTATTTTGGTTGGCTATGCTCATGATTTGTTGTGA 1143 0.5556 MLPLRLSAVVSSLILCFLFPPFFCLGIRSFPTAEDGGAFFHYAEAPEYRNGAGCPAPSTHTAIPSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPESVFFHFVAAEFDPASPRVLTRLVRSIFPSLNFKVYIFREDTVINLISSSIRLALENPLNYARNYLGDMLDACVDRVIYLDSDVVVVDDVRKLWRVPLTDARVIGAPEYCHANFTKYFTEEFWNDPLLSRVFSSRKPCYFNTGVMVMDLVRWREGNYRKRIENWMELQRKKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVNGVCRSLHPGPVSLLHWSGKGKPWVRLDEKKPCPLDRLWEPYDLYKPKQTRDRVRDQNWGFSSSILVGYAHDLL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01123 380 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 17 355 - -
Viun2g01123 380 Pfam Glycosyl transferase family 8 72 332 IPR002495 GO:0016757
Viun2g01123 380 SUPERFAMILY Nucleotide-diphospho-sugar transferases 71 355 IPR029044 -
Viun2g01123 380 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 72 347 IPR029044 -
Viun2g01123 380 FunFam Hexosyltransferase 72 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01123 Viun-Chr2 22081304 22083129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01123 4 369 Glycosyltransferase AT1G70090 72.178 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01123 - - vra:106762685 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01123 2 22081304 22083129 Viun2g01123 2 22081304 22083129 ECH