Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01117 ATGTCTTCCAGGCGCCACTCCCTCGGCGGACCGCCGCCGCACGCCGCCGCTGAGTCCACTCACAACCTCCGACAGCGAGTCATCACGTGCCTCAACAAACTCTCCGACCGCGATACTCTCGCCGGCGCAGCCGCGGAACTTGAGTCCATCGCCCGAACCCTAAGCCATGACTCATTCTCCTCTTTCCTCTCCTGCATTCACAACACGGATTCTTCTTCCAAATCTCCTGTTCGCAAACAATGCGTTCATCTCTTAAACATTCTCTCGCGCTTCCACGGGGAAGCTCTCTCCTCGTTTCTTCCGAAAATGCTCGCCACTGTGCTCCGTCGCCTCCGCGACACCGACTCCGCCGTGCGATCCGCATGTGTGGACGCAGTCGCGGAGATGTCGACGAGGATCACGCGGCCGCCGTTCGCCACCGCGTTCCTGCGGCCGCTCATGGACGCGCTGGTGCAGGAACAGGATGCCAACACGCAGATCGGCGCCGCGCTGTGCCTCGCGGCGGCTGTTGAGGCCGCGCCGGATCCCGACGCGGAGGCTCTCCGGCGGAGCGCGCTGCCGCGGCTGGGGAAGCTAGTGAAGAGCGATGTGTGCAGAGCGCGGGCGGCGCTGCTGGTGCTGATCGGAAGCGTGGTTGCCGTCGGCGGTGCGTCGAGCCGTGGTTCGATGAGCTGGCTCGTGCCGTGCCTGGTCGAGTTCCTTGGCAGTGAGGACTGGACGGTGAGGAAAGCCGCGGCCGAGGCTCTGTTGAAGGTGGCTTCCGTAGAGAAAGACCTGGCCTCGCAGCACAAGGTTCTGTGTTTAGATTCGTTGCAGAATAGAAGGTTTGATAAGATCAAAGTAGTTCGAGAAACTATGAATCGTGCTTTGGAGACGTGGAGGGATGTAACTGAGGATGCTCCCGCGATGGTTAAGTCCGAATGTGATTCCGTCTGTGGCACAGATTATGGCAAAGGTCAGCCTGTCACTAAAAGTCCACCCAGTGTTGGCTCTAAGTCTTCTAAAACAGTCCCTGCCAACAGGTCTCCTCCTCCGTCTGGGGTTTCATTCATGTCCTCCACAAAAGGAGAAAATTTTCTAAAGAGTAATGAGAAGAATTCAAGAATGGCAACATTGCATCAGCGTGATGATGAGAAATCCTCAGTTGAGAAACTTGAAGGTCTGTTTTCGAGCTCCGCCCACTCAAATATGTCTAAGGAAGATGTTGTTAAAAGATGCGATGTAGAACATTCTAGCCCAACCCCATATCAAAATGGAGTAAATTCGAGGGCAGAGATAAAGCGTGTTCTCTTTAGCAAGATGTCTGATGAAAAAGTGAAGAGATTCAGTGGTTCAAAATCTCGTGTGGTTCCATGTTACGATGACCCAAATGTTGTAGACAATAGTGCAAATGATGTTTGTGACAATCCACAAGACGTTGAGGATTTTTCTTTGATTCGGGAACAACTTATTCAAATTGAAAACCAGCAATCAAATCTATTAGACACCCTTCAGAGATTTATTGGAAGCTCCCAAAGTGGTATGAATTCTTTGGAGTCACGAGTACATGGTCTAGAGATGGCCCTGGATGAAATTTCATATGATTTGGCAGTTTCAAGCGGCAGGTTTTCCTATACTGATGTCACAGATGACACCTGTTGCAAGCTACCTGGTACTGACTTTTTGAGTTCTAAATTTTGGAAGAAAACAGAAGGTCGGTATTCCACATCAAAGTTCTCTTTAGGAAACATAGCATCAACAAATGGTGTGCATAATGGAACAACCAATAAAGATGGAGGTAAAGAAATATTTACTCCAAATAACAATAGATTGCAGCATGGTAAGGGTGGATATTTTGTGAACCAATTGGCTGAAGTTCAAAGCAACAATTTTAAAGGGCTTCATACGTATAAAATGTCTACAAACAGGGTCCAAGATGCCATGAGAGCACAAACTGATAATGCCAGCAGATATGGTGGCATTCACCCAGCTACTGAAGCACCGAGAAACCATAATGTCAGGTCATCTGTATAG 2013 0.5002 MSSRRHSLGGPPPHAAAESTHNLRQRVITCLNKLSDRDTLAGAAAELESIARTLSHDSFSSFLSCIHNTDSSSKSPVRKQCVHLLNILSRFHGEALSSFLPKMLATVLRRLRDTDSAVRSACVDAVAEMSTRITRPPFATAFLRPLMDALVQEQDANTQIGAALCLAAAVEAAPDPDAEALRRSALPRLGKLVKSDVCRARAALLVLIGSVVAVGGASSRGSMSWLVPCLVEFLGSEDWTVRKAAAEALLKVASVEKDLASQHKVLCLDSLQNRRFDKIKVVRETMNRALETWRDVTEDAPAMVKSECDSVCGTDYGKGQPVTKSPPSVGSKSSKTVPANRSPPPSGVSFMSSTKGENFLKSNEKNSRMATLHQRDDEKSSVEKLEGLFSSSAHSNMSKEDVVKRCDVEHSSPTPYQNGVNSRAEIKRVLFSKMSDEKVKRFSGSKSRVVPCYDDPNVVDNSANDVCDNPQDVEDFSLIREQLIQIENQQSNLLDTLQRFIGSSQSGMNSLESRVHGLEMALDEISYDLAVSSGRFSYTDVTDDTCCKLPGTDFLSSKFWKKTEGRYSTSKFSLGNIASTNGVHNGTTNKDGGKEIFTPNNNRLQHGKGGYFVNQLAEVQSNNFKGLHTYKMSTNRVQDAMRAQTDNASRYGGIHPATEAPRNHNVRSSV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01117 670 MobiDBLite consensus disorder prediction 1 21 - -
Viun2g01117 670 MobiDBLite consensus disorder prediction 324 367 - -
Viun2g01117 670 Pfam HEAT repeat 226 254 IPR000357 GO:0005515
Viun2g01117 670 SUPERFAMILY ARM repeat 21 299 IPR016024 -
Viun2g01117 670 ProSiteProfiles HEAT repeat profile. 226 264 IPR021133 -
Viun2g01117 670 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 20 590 IPR033337 GO:0005874|GO:0008017
Viun2g01117 670 MobiDBLite consensus disorder prediction 649 670 - -
Viun2g01117 670 Gene3D - 14 405 IPR011989 -
Viun2g01117 670 FunFam ARM repeat superfamily protein 23 213 - -
Viun2g01117 670 MobiDBLite consensus disorder prediction 318 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01117 Viun-Chr2 21986429 21991008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01117 - - gmx:100781440 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01117 2 21986429 21991008 Viun2g01117 2 21986429 21991008 ECH