Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01098 ATGGATCAGTCAGCATTCACCACTCCGAGAGGATCTTTGTCGTCCAGCATTGGAGACGCTTCAGAGCTTGAGGCCAATCTCACACTCAGTGATAGGCTCAAGGTTTTCAAAAGCTCTTCCTTTGATCCCAATGGCTATGTCGCCTCCAAATCCCGCAGCATGAACGAAAAGGAGATAAGACACTTGTGCTCTTATCTTATCGAGCTGAAGAAGGCTTCAGCAGAAGAAATGCGTAAAAGTGTTCTTGCTAACTACTCGGCCTTTATACGTACGTCCAAAGAGATATCTGATCTTGAAGGAGAGTTGTTGTCCATGAGAAATCTTCTATCCACCCAGGCTGCTTTGGTTCATGGTTTAGCAGATGGGTGCGAGCTTAGTCCCATGATCAGTGGCAATGAAGATTCAGAATTGGATGACATACTAGATGAAAAAACAGAACTATCCAAGACAGAAAAATGGCTAATAGGATATTTAGAAACCCTTGAGGTTTTATTAGCGGAGAAAAGAGTGGATGAAGCAATGGCTGCTTTGGAAGAAGGAGAAAACATGGTAAAAGAAATTAATAAAGTGGGAACTTTAAGTCCAAGTTTATTTGAGGCATTGCAAGATGCTATTGCTGAGCATAGACAAAAACTAGCAGATCAACTAGCAGAAACTATCTGCCAGCCATCAACTAGCAGTGCAGAGATTCGATCAACAGCGTTGTCATTGAAAAAACTTGGGGATGGTCCTCGTGCTCACACATTACTACTAAGTTCTCGCCAAGGAACATTACAACGTACCATGAAAACCTTTCAATCCAGCAATTATGGTGGGGTTGGGGCGTTTACTGCTGCCCTTTCACAACTTGTTTTTTCCACCATTTCACAAGCAGCATTAGATTCTTTGTCAGTGTTTTCTGAAGAACCTGCATATACTTCTGAACTAGTAACCTGGGCAGTTGCAGAGGCTGAGAAACATGCTGCTCTCCTTAAGAAATGCATTCTTGCCTCTACAGCTGCAGCAGGAGGTTTGAGAGTTGCATCTGAATGTGTTCATGTTTGCATGAGTCATTGCTATCTTCTAGAGACTACTGGGCTAGCCCTTTCCCCTGTCCTAATAAAATATTTTAGGCCCTTTGTTGAACAAGCACTAAAAACAAATTTGAAAAGAATTGAACAAAGTAGTTCTGCACTGGCTGCTGCAGAGGATTGGGTACTTGCTTTTGCACCAACCAGCAACAGGCCTTCTGGCCAACCTCCATCTTCTCACAGTAACTTAGGTTTGCTCCAACCAAAGCTTTCAAGCAGTGCTCACAAATTCAACTCAATGGTTCAGGAATTGTTTGAAGATGTTGGGCCTCTTGAAATACTGCAATTGGATGTTCTAGCAGTTGAAGGCCTTATACATGTGTTCAACTTCTATGTCAACTTGCTGATAAATGCATTGCCTGGATCAGTGGTAACTGAGAACATTGAAGGGCACAGAATTGTTAAGCTTGCTGAGACTGAAGCACAACAGATAGCATTGATGGCAAATGCAATATTACTGGCAGATGAACTGCTTCCACGTGCTGTTGCCAAGCTTTCACATAGCACAAAAGGTGATGACTCTCAGAAAAAAGGATCAGAAAAACAACGTGAACTCAAGAAAAGGCTCCAACGTGAAGTTGATCGCCTGCGTGACAGCTTTTGCAGGCAACATGCTCTTGAACTCATTTTCACAGAAGAAGGAGAAGCTCGTCTAAATGCATTAATATATTTGGGAATGGATGGTAACGTGGAACAACCTGAATGGTTTCCTTCTCCAATCTTTCAGGAAATTTTTGCTAAGCTTACCGAAGTGGCAAGCGTTGCAGCAGACATGTTTGTAGGAAGGGAAAGATTTGCCACTGTCTTATTGATGAGATTAGCAGAAACAGTGGTCCTGTTTCTTTCTGATGACCAAGCCTTCTGGGAAGAGGTTGAGACAGGATCAACACCTTTGGGTCCCATAGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTGCATCCCAAGGTCGTTACTTATCTCGTCATCTGCATCAAGCTATTAAAAACATTATTGAAAGGGCTATCAATGCTCTTGCTGCTACAGGTCTAGATCCCAACAGTGTCTTGCCCGAGGATGAATGGTTTGTTGAAGTTAGTGAAATTGCTATAAAGATGTTAACTGGTAGAGCTGCCTTTGATAGTGTGGAGGAAGATATTCCAAGCCCAACTTCATCTATTCAAACATAG 2250 0.4236 MDQSAFTTPRGSLSSSIGDASELEANLTLSDRLKVFKSSSFDPNGYVASKSRSMNEKEIRHLCSYLIELKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLADGCELSPMISGNEDSELDDILDEKTELSKTEKWLIGYLETLEVLLAEKRVDEAMAALEEGENMVKEINKVGTLSPSLFEALQDAIAEHRQKLADQLAETICQPSTSSAEIRSTALSLKKLGDGPRAHTLLLSSRQGTLQRTMKTFQSSNYGGVGAFTAALSQLVFSTISQAALDSLSVFSEEPAYTSELVTWAVAEAEKHAALLKKCILASTAAAGGLRVASECVHVCMSHCYLLETTGLALSPVLIKYFRPFVEQALKTNLKRIEQSSSALAAAEDWVLAFAPTSNRPSGQPPSSHSNLGLLQPKLSSSAHKFNSMVQELFEDVGPLEILQLDVLAVEGLIHVFNFYVNLLINALPGSVVTENIEGHRIVKLAETEAQQIALMANAILLADELLPRAVAKLSHSTKGDDSQKKGSEKQRELKKRLQREVDRLRDSFCRQHALELIFTEEGEARLNALIYLGMDGNVEQPEWFPSPIFQEIFAKLTEVASVAADMFVGRERFATVLLMRLAETVVLFLSDDQAFWEEVETGSTPLGPIGLQQLYLDMQFVMIFASQGRYLSRHLHQAIKNIIERAINALAATGLDPNSVLPEDEWFVEVSEIAIKMLTGRAAFDSVEEDIPSPTSSIQT 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01098 749 Gene3D - 142 264 IPR042561 -
Viun2g01098 749 Coils Coil 170 190 - -
Viun2g01098 749 Coils Coil 536 556 - -
Viun2g01098 749 Coils Coil 198 218 - -
Viun2g01098 749 Gene3D - 273 376 IPR042560 -
Viun2g01098 749 Pfam Vps51/Vps67 36 114 - -
Viun2g01098 749 SUPERFAMILY Cullin repeat-like 144 378 IPR016159 -
Viun2g01098 749 Pfam Exocyst component 84 C-terminal 152 362 IPR032403 -
Viun2g01098 749 PANTHER EXOCYST COMPLEX COMPONENT 8 15 747 IPR033961 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01098 Viun-Chr2 21814728 21820052 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01098 K19986 - gmx:100818886 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01098 2 21814728 21820052 Viun2g01098 2 21814728 21820052 ECH