Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01087 ATGGAGTTATTCACCAAAACCAACGTGGTGAGGCTGCGGAGCCACCTCGACAAGTATCTCGTGGCCGATGCCGACGGCAGCCAGGTCCGCCAGAGCCGTAAGGCCCCCGGCCGGGGAGCGCGGTGGACCGTAGAGGAGATAACGGACGGAGGAAGCAAAAAGGTGCGCCTCAGGAGCTACCACGGAAGGTACTTAACGGCGACGGAGGCGCCGTTTCTGTTTGGGATGACGGGAAAGAAGGTGCTCCAGAGGGAGTTCGAGCCCGGTGCGGATTTCAAGCACGACTGGGAAGTGACACGCGACGGGTTCCAGGTGAAGTTGATGTGCTGGAGTGGCAAGTTCCTGCGCGCGAACGGAGGGACACCGCCATGGCGGAGCAGCGTGACGGTGGACGAGCCGCACAGTTCGGCGACGAAGGATTGGGTTCTGTGGGATGTGGAGACTGTGGAGGCGGTGGAGGAGTTGGTGGATGATTTGTGCGACAGCACGGTTTCGTCTATCGCTTCCGATGATTTCTCCGTCGATTCGGAACCAGCGTCGCCGATGTCCGTTTTCGCCCTCAAGTCGCCGCCGGCGAGGCGGAACTCGAACCTGATGCTGCAGGCAATAAGTTCCAACAAGTTCAGAAATGGCATGGACTTCTTCCACCGCGCCAAGGCGGTGCGTCTCCGCAGCCACCACGACAAGTACCTGCTCGCGGATGAGGACGAGGAGTCCGTCACGCAAGGCCGCAACGGCTCCTCCAAGAGCGCGCGCTGGATCGTCGAATACGTCCCCGAATACGACAACATAATTCGCCTGAAAAGCTGTTACGGAAAGTACCTCACCGCCTCCAACCTCAACTTCCTTCTCGGCATGACGGGCCACAAGGTCCTCCAGACCCTCCCGCAGAGGCTCGACTCCTCCGTCGAGTGGGAGCCCGTCAAGGACGGAGGCCACGTCAGGCTCAAGACTCGCTACGGCAACTTCCTCCGCGCCAATGGGGGTGTGCCGCCCTGGAGAAACTCCGTCACGCACGATATTCCGCACAGGTCCGCCACGCAGGACTGGATCCTCTGGGACGTGGATGTCGTCGAGATTTATGTCAACTCTCCGGCGAATAGCAGTAAACCCTCTGCTCCCCCGTTGCCAGGTTCCGACCCTGTTCCAGTCCTCGCCAGCGCGCCGGTTCCCCCACCACCATCCTTGTCTGCCAGCTTATCAAGACAAAAGTCGAATGAATTGAATGGTTCATCTAAGATGGAAGGGAGGATTATTTACTACAATATTGCTGAAGAGAACGGAGAGGTGTTGGATGAAGGTTCGCAGGGCTATTCTTTGATTTTCAAAGGGATTGGAGTTGAAGAATTGACTCGAAAGTTTGAGGAAGAGACAGGTCTAGAGGGAATCATTGTATGTAATCGGAGTCCTTTGAATGGAAGGCTTTATCCTCTTCGCTTGCAGCTTCCTCCAAACACCGTCACCATGCGAGTTGTTTTGGTTCTTCCCATGTCAAATGTGGCTAGAGAATTAGAGGCAGAAGGCTTACTGTGA 1533 0.5682 MELFTKTNVVRLRSHLDKYLVADADGSQVRQSRKAPGRGARWTVEEITDGGSKKVRLRSYHGRYLTATEAPFLFGMTGKKVLQREFEPGADFKHDWEVTRDGFQVKLMCWSGKFLRANGGTPPWRSSVTVDEPHSSATKDWVLWDVETVEAVEELVDDLCDSTVSSIASDDFSVDSEPASPMSVFALKSPPARRNSNLMLQAISSNKFRNGMDFFHRAKAVRLRSHHDKYLLADEDEESVTQGRNGSSKSARWIVEYVPEYDNIIRLKSCYGKYLTASNLNFLLGMTGHKVLQTLPQRLDSSVEWEPVKDGGHVRLKTRYGNFLRANGGVPPWRNSVTHDIPHRSATQDWILWDVDVVEIYVNSPANSSKPSAPPLPGSDPVPVLASAPVPPPPSLSASLSRQKSNELNGSSKMEGRIIYYNIAEENGEVLDEGSQGYSLIFKGIGVEELTRKFEEETGLEGIIVCNRSPLNGRLYPLRLQLPPNTVTMRVVLVLPMSNVARELEAEGLL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01087 510 Pfam Domain of unknown function (DUF569) 212 353 IPR007679 -
Viun2g01087 510 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Viun2g01087 510 Gene3D - 220 340 - -
Viun2g01087 510 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 212 494 - -
Viun2g01087 510 SUPERFAMILY Actin-crosslinking proteins 216 358 IPR008999 -
Viun2g01087 510 MobiDBLite consensus disorder prediction 366 409 - -
Viun2g01087 510 FunFam BnaC05g19630D protein 216 356 - -
Viun2g01087 510 SUPERFAMILY Actin-crosslinking proteins 7 147 IPR008999 -
Viun2g01087 510 Gene3D - 4 148 - -
Viun2g01087 510 MobiDBLite consensus disorder prediction 370 396 - -
Viun2g01087 510 FunFam BnaC05g19630D protein 5 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01087 Viun-Chr2 21687553 21695228 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01087 - - gmx:100811752 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01087 2 21687553 21695228 Viun2g01087 2 21687553 21695228 ECH