Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00985 ATGAAACTCAACTTTTGTATTATATCCAAACTTCTGATACTGCAATGTCTATCAGTTGCATGCCTTTCTCAGGACTTTGATTTCTTCTACTTTGTTCAGCAGTGGCCAGGAGCATACTGTGACACAAGGCAGAGCTGCTGTTATCCTAAGACTGGGAAACCTTCTGCAGATTTCAGCATTCATGGACTTTGGCCTAACTACAATGATGGCTCATGGCCCTCAAACTGTGACCCTGACAGTGTCTTTGATAAATCTCAGATCTCAGAGCTTATAAGCAGCATGGAGAAGGAGTGGCCATCTCTGAGTTGCCCAAGTAGCAATGGCATGAGGTTCTGGTCACACGAATGGGAAAAACATGGCACGTGTGCACAATCTGAGCTTGATCAAACCGAGTACTTTGAAGCAACTCTCAAACTCAAGAAAAAACTAAACCTCCTTAAGGTCCTCAACAATGCAGGGATTCAACCAGATGATGAATTTTACACTCTAAATAGCATAATAAATGCTATAAAAGAGGGCACTGGGTTTACCCCTGGAATAGAGTGTAACAGAGATTCAGCTCATAACAGTCAACTCTACCAAGTTTACATGTGTGTGGACACTTCTGGGTCAGATTTTATTGAGTGCCCTTTGCTTCCAAAGGGTAAATGTGGTGAACAAGTTCAATTTCCCAAGTTTTGA 681 0.4214 MKLNFCIISKLLILQCLSVACLSQDFDFFYFVQQWPGAYCDTRQSCCYPKTGKPSADFSIHGLWPNYNDGSWPSNCDPDSVFDKSQISELISSMEKEWPSLSCPSSNGMRFWSHEWEKHGTCAQSELDQTEYFEATLKLKKKLNLLKVLNNAGIQPDDEFYTLNSIINAIKEGTGFTPGIECNRDSAHNSQLYQVYMCVDTSGSDFIECPLLPKGKCGEQVQFPKF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00985 226 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Viun2g00985 226 SUPERFAMILY Ribonuclease Rh-like 20 225 IPR036430 GO:0003723|GO:0033897
Viun2g00985 226 Pfam Ribonuclease T2 family 26 209 IPR001568 GO:0003723|GO:0033897
Viun2g00985 226 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Viun2g00985 226 Gene3D - 20 226 IPR036430 GO:0003723|GO:0033897
Viun2g00985 226 PANTHER RIBONUCLEASE T2 21 218 IPR001568 GO:0003723|GO:0033897
Viun2g00985 226 CDD RNase_T2_euk 26 217 IPR033697 -
Viun2g00985 226 FunFam Ribonuclease 3 20 226 - -
Viun2g00985 226 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00985 Viun-Chr2 20546080 20547954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00985 K01166 - gmx:100778239 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00985 2 20546080 20547954 Viun2g00985 2 20546080 20547954 ECH