Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00938 ATGACATTTACGAAAGACTTTAAGCAACAAATGGTGCCTGAGTGGGAGAAAGAGTACATGGACTATGAAGGCCTGAAAAGAATACTGAAAGAGATGAAAAGTAGCAAACAAAGTAAACACAACAGGTCATTGCAGCACAGACTGAAACTTGAAAGAGCATTCAGTGGAATTCACTTGCAGGGTAGCAATCACCAGAGAGAGGGGAATATTGAAGAAGAGGTTATAGAAGTTAAGACATTAGAAGAAGAAGAAGGTTCCAAAGAGTTATATAAGACAGACTTTCACAAGCTCCATGAAGAAGGAGGAGAAGCTGAGGCAAGACTCTTTCAGAAGCTTGATGAAGAGCTCAACAAGGTCAATGCATTTTACAAGGATCAGGTGGAAGCAGCCAACCATGAATCCAACCTTTTGAGTAAACAGGTGGAGGCTTTGGTTGCACTAAGAGTAAAGGTGAAAAGTCCTGATGCAGAGTTGAAGCAGATTGTCTCCTCACCTAAAGAGGCTGCAGATCAAAATCATCAGCAAAAGGATTCTATGACAGGCCCTGAAGTTGATCCTGTTCGACAAACCAATAGAAATATTCATCATCATGAGGAGCAAGTAGAAGCACACAATAATTACAAAAGAAGAGATCCCTTGGAAATCCTTGAGCATGTAAAGGTTGATGATTCTCTTCAATCTCCAAAATCAACAATTAAAAAAGCGTTTACTGATTCCAGTGATAATGATAATGAATTGAGCATCAGCAAAGAGGAGCTGAAAAAAATTGAAAAGCAACTAAGACTTGTGTTTGTTGAGTTCTATCAGAAACTCCTCCATCTCAAAGATTACAGTTTTATGAACCTGTCAGCATTTTCCAAGATCATGAAGACCTATGAAAAGCGTACATCAAGGGCAGCATCTACAGCCTACATGACAGTAGTGGATAATTCCTATCTAGGAAGTTCTGATGAGGTTAATTTTCTATTGGAGAAAGTAGAGTCTACCTTCATCAGAAACTTCACACACTCAAATCACAAAAAGGGGAGGAAGTTATTAAGGCAAAAAGCAAAAACAGAAAAGCAAAGCATTACATTTTTTACAGGATTCTTTTGTGGTTGCTTTCTTGCTCTATTGGTTGCTACTATATTAAGAATAACATCTCAGCAATTCATAAAGAAGAAAAAGGGAACATTTTACATGGAAAACATTTTCCCACTGTACAGGGCTGGAACTGAATTGGACTACAGACAAATTTTCCTTCTGACCTCTGGTCTTGCAGTGGTAGCACTATTATGTTTCCTCATAAATTTGCAGATTGAGATGAACTCAAGGAGTCAACAGTATAAGACACTCACTGAACTTGTTCCTCTAATCTTAGTTGTTCTTGTTCTTTTGATTACCTTTTGCCCTCTGAACATCTTATACCGCTCAAGTCGTTTCTTCTTTATCCGATGCTTATTTCGCTGTATATGTGCTCCTTTTTTCACGGTTCGTCTTGCAGATTTCTTCTTGGCTGATCAGCTTACTAGCCAGTTCCAAGCATTCAAGAGTGTGGAGCTTTACATATGCTATTATGGGCTTGGAGAACACTCAAGGAGGCAAAAGAAATGTCACACTCGTGGTATCTATAACATACAGTATTTCATCGTTGGCATCATTCCTTATTGGTTTCGCCTAGCACAGTGCATGCGTCAATTCTACGAAGAGGGAGACATCAACCGTGCATTCAACAGTTTAAATTATCTCTCAACAATTACTGCAATGGTCTTTCGGACAGCCTTTGAACTAAAGAAGGGAAACAGTTGGAAAGTGTTGGCACTGGTATTTTCAGCACTGGCAGTTCTTCAGAACACATATTGGGACATTGTTAAGGACTGGGGGCTCCTGCAAAGGCTTTCAAACAACCCCTATTTGAGAGATAAACTAATACTTCCCCACAGAAGTATCTACTTCATAGCCATGGTTGTGGACATAGCTCTTAGAATTTCATGGATGCAATTGGTGTTTGAAATGGATTGGAGTCCCCTTCGTAAAGTGGCAATAATTACAGTTACTTCCTGCCTTGAGATTATTCGGCGTGGCATTTGGAACTTCTTCAGGTTGGAGAACGAACACTTGAACAATGTTGGAAACTACCGTGCCTTCAAATCTGTTCCTCATCCTTTCAGTTACTACGATGAGGAAAAGGACAAGGATGAGTAG 2184 0.3961 MTFTKDFKQQMVPEWEKEYMDYEGLKRILKEMKSSKQSKHNRSLQHRLKLERAFSGIHLQGSNHQREGNIEEEVIEVKTLEEEEGSKELYKTDFHKLHEEGGEAEARLFQKLDEELNKVNAFYKDQVEAANHESNLLSKQVEALVALRVKVKSPDAELKQIVSSPKEAADQNHQQKDSMTGPEVDPVRQTNRNIHHHEEQVEAHNNYKRRDPLEILEHVKVDDSLQSPKSTIKKAFTDSSDNDNELSISKEELKKIEKQLRLVFVEFYQKLLHLKDYSFMNLSAFSKIMKTYEKRTSRAASTAYMTVVDNSYLGSSDEVNFLLEKVESTFIRNFTHSNHKKGRKLLRQKAKTEKQSITFFTGFFCGCFLALLVATILRITSQQFIKKKKGTFYMENIFPLYRAGTELDYRQIFLLTSGLAVVALLCFLINLQIEMNSRSQQYKTLTELVPLILVVLVLLITFCPLNILYRSSRFFFIRCLFRCICAPFFTVRLADFFLADQLTSQFQAFKSVELYICYYGLGEHSRRQKKCHTRGIYNIQYFIVGIIPYWFRLAQCMRQFYEEGDINRAFNSLNYLSTITAMVFRTAFELKKGNSWKVLALVFSALAVLQNTYWDIVKDWGLLQRLSNNPYLRDKLILPHRSIYFIAMVVDIALRISWMQLVFEMDWSPLRKVAIITVTSCLEIIRRGIWNFFRLENEHLNNVGNYRAFKSVPHPFSYYDEEKDKDE 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00938 727 ProSiteProfiles SPX domain profile. 1 306 IPR004331 -
Viun2g00938 727 Pfam SPX domain 1 308 IPR004331 -
Viun2g00938 727 ProSiteProfiles EXS domain profile. 532 726 IPR004342 GO:0016020
Viun2g00938 727 Pfam EXS family 359 700 IPR004342 GO:0016020
Viun2g00938 727 Coils Coil 63 83 - -
Viun2g00938 727 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 404 721 - -
Viun2g00938 727 MobiDBLite consensus disorder prediction 165 185 - -
Viun2g00938 727 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00938 Viun-Chr2 20070056 20075243 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00938 - - gmx:100795093 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00938 2 20070056 20075243 Viun2g00938 2 20070056 20075243 ECH