Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00358 ATGGCTTCTTCTCATCCCTTGGAAACCACAAAACAAAAGGTAGGTGGTGAGAAACCAACTCCACTTCACGAAAACGTTTTGCAGAAGCATGCTGCTTTCTTTGACAAGAATCACGATGGTGTCATTTATCCATGGGAAACTTTTCAAGGGTTACGTGAAATTGGAAATGGAATCTTTTCGTCCGTTGGACTTTCTCTGTTCATCAATTTGGGTCTTAGTCAAACTACTCGTCCAGGAAAGTTTCCATCTTTACTTTTCCCAATTGAAATTAAGAACATCCAATTGGGCAAACATGGCAGTGACACTGGAGTCTATGATACTGAAGGAAGGTTTGTTCCCTCAAAATTTGAAGCCATTTTCACCAAACATGCACATACTCAACCAAATGCCCTAACATACGATGAGCTAATGCAGATGATACAAGCAAATAGAGACCCCAAAGATATCAAAGGAAGGATTGGTGGCTTGGTAGAATGGAAAATCCTTTATAAAGTTGCCAAAGACAAGAGTGGCTTACTACAGAAGGAAACAATCCGAGGTGTTTATGATGGAAGTTTGTTTGAAATGTTGAAAAAGGAACATTCTACACACACAAAAAAGTGA 603 0.393 MASSHPLETTKQKVGGEKPTPLHENVLQKHAAFFDKNHDGVIYPWETFQGLREIGNGIFSSVGLSLFINLGLSQTTRPGKFPSLLFPIEIKNIQLGKHGSDTGVYDTEGRFVPSKFEAIFTKHAHTQPNALTYDELMQMIQANRDPKDIKGRIGGLVEWKILYKVAKDKSGLLQKETIRGVYDGSLFEMLKKEHSTHTKK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00358 200 MobiDBLite consensus disorder prediction 1 21 - -
Viun2g00358 200 Pfam Caleosin related protein 24 190 IPR007736 -
Viun2g00358 200 PANTHER PEROXYGENASE 3-RELATED 15 197 IPR007736 -
Viun2g00358 200 SUPERFAMILY EF-hand 21 182 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00358 Viun-Chr2 7305311 7310633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00358 16 200 Acyl Lipid Metabolism Gene Families AT1G70670 59.459 1.23e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00358 K17991 - gmx:100800915 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00358 2 7305311 7310633 Viun2g00358 2 7305311 7310633 ECH