Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00253 ATGGGTCTGAAGTTTACACATGCAGTGATGATAATAGTTATAATGAGTGCTTCAATGTTTTCAGTGAGCATGGCCAACAAGGATTGGTTCCCTGCTTTCAACTACACTGATTGGTGGTCCAGATTTGGGAATCATCAACAAAACAAAACACAGCAACAACCAAGGCAGATTGTTGTGGGTGGTTCTGAGCATTGGCACTTTGGCTACAACTACTCTGATTGGGCTATCAAGAACTTCCCATTTTACCTCAATGACACTCTAGTGTTCAAATATGATGCTCCAAATGCCACCACTTTCCCACACAGTGTCTACATGTTCAAAAACTATGGCAGCTTCTTGAAGTGTGACATAAAAAAGGCTAAGATGTTGGCAAGTCCGGTGCAAGGTGGAGGAGAGGGGTTCAAGTTTCTGTTGCAGAAGTGGCAGCCTCATTACTTTGCCTGCGGTGAGAGAAATGGCTTCCATTGCAGCAATGGCACCATGAAGTTTGCTGTCATGCCAATGTTTCGTCCCTTCTGGCCGTGGCCATGA 531 0.4482 MGLKFTHAVMIIVIMSASMFSVSMANKDWFPAFNYTDWWSRFGNHQQNKTQQQPRQIVVGGSEHWHFGYNYSDWAIKNFPFYLNDTLVFKYDAPNATTFPHSVYMFKNYGSFLKCDIKKAKMLASPVQGGGEGFKFLLQKWQPHYFACGERNGFHCSNGTMKFAVMPMFRPFWPWP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00253 176 Gene3D - 53 168 IPR008972 -
Viun2g00253 176 SUPERFAMILY Cupredoxins 55 167 IPR008972 -
Viun2g00253 176 ProSiteProfiles Phytocyanin domain profile. 55 169 IPR003245 GO:0009055
Viun2g00253 176 PANTHER GLYCINE-RICH PROTEIN-LIKE 1 171 - -
Viun2g00253 176 Pfam Plastocyanin-like domain 65 159 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00253 Viun-Chr2 4971298 4972200 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00253 49 165 Miscellaneous Gene Families AT3G27200 29.915 1.08e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00253 - - gmx:100813442 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00253 2 4971298 4972200 Viun2g00253 2 4971298 4972200 ECH