Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00234 ATGGGTCCTATAACGCCCACACCCACCATGGACATCATCAATGATCTCATTGAAGAGGCCAAGCTCCGTCTTCTCTGGTGGGCTCTTTGTATATTCGCCATTTCCTATTTCTTCACTCATACAAGTAAATCTATGTGGATGAATCTTCCCATGTCCATTCTGTTTGTTGCTGCTCTGCGCATTCTTTTGAACAAGGTGGAATTCCGTTGGAAGGTTCAGCCACCAAGATTACAAACTTATTTATCTCATTTGGAGAAAAATCAGCTGCCTCTGAATGATGAACGACTCTCTTCTTCACCTCCCCCTCCCCCTCCCAAATGGAAGAAGATTGACTCTCCTGTTGTGGAGGCTGCTTTGAATGATTTCATTGATCAGATTTTGAAGGATTTCGTGATAAATATGTGGTATTCAGACCTTACTCCAGATATGGAGTTTCCTGAGCTGATACGAGACTTAATCATGGACGCTATTTCTGAAGTGTCTGTGAGGGTTAAAGAGATAAACCTTGTTGACTTGCTCACGAGGGACATAGTTGATTTAATAGGGGATCATATAGACCTTTTCAGAAGAAATCAAGATGCTATAGGTGTTGATGTCATGTTAACCTTATCTTCTGAGGAGAGGGATGAAAGATTGAAGTTTCATCTATTGAATTCTAAGGAGCTTCATCCAGCTTTAATATCTCCAGAGAGTGAGTACAAGGTTCTCCAGAGGCTAATGAGTGGAATATTAGCTACTGTACTGAGAAAACGAGAAGCTCAATGTCCTGTCATTCGCTGTATAGCTCGGGAAATTTTAACTTGTTTGATCTTGCAACCTATCATGAACTTGGCAAGCCCTGCGTATATCAACGAGCTGATTGAATCCCTTCTACTTGTCCTTAATGATGATGGTATAAATTGGATGGCGGCCCTTGAACATTCAACCAATACAACTCATAATCATGGCCATTCTGATGCTGGGGGTGGACATGATAATCATACAGCCTCTGCTGATTGGGCACAAATGCTGGAGGCTGCAAGTCAGAGAAGAACCGAAGTTCTTATGCCTGAGAATCTGGAGAACATGTGGGCTAGAGGAAGGAATTATAGACGGAAACAGCATAAAAATACCAAAACCGGCTATCAGGACCCTTCACTGAAATGTCCTGCTATTGATGCAATTCAAGAAGGAATGGGTGCTATGCATTATGTGGGTTCAGATCCACACCTAAATGTTGTAGGCACAAATAGGTCAGAGTCTTCACCGGATCCTGACAAGGAACTCTGTTCTGAAGTAGACCATCATGTTGATGAGGTGAAGGATATCAGGGATATCCCTTCTAAAAAATTTAAAGATCTAAAGAGATCCAACAGTGCTTGTCTCCTGGGAAACCAACCTCTTCTTAAGGTATGCTCCCCAAGGTCAGAGGTGCACAACCCTGAATCTGAGAAACATGGTGAGGGATATCGGGGAAAGAGTGGTTCTGAAATGGTTGTGAGAAGAGACGGACATTCTGTTCCAAAGCTTCGGTGCCGGGTTATGGGAGCATATTTTGAGAAACTAGGATCCACTTCTTTTGCTGTATATTCAATTGCAGTGACTGATGGTCTAGAGAAAACTTGGTTTGTTAGAAGAAGATACAGGAATTTTGAGCGATTGCATCGACATCTAAAAGATATTCCCAATTATTTGCTACATTTGCCTCCTAAAAGGATATTTTCCTCAAGCACAGAGGATGCATTTGTCTATCAGCGTTGCATTCAGTTTGATAAATATCTCCAGGATCTCCTATCAATAGCTAATATTGCTGAACAACATGAGGTGTGGGACTTTTTAAGTGTTTCCTCAAAGAACTACTCCTTTGGGAAATCTTCTTCAATGATGAGGACCCTGGCAGTCAATGTAGATGATGTTGTGGATGATATTGTACGACAGTTTAAAGGTGTTTCAGATGGTTTAATTCGAAAGGTTGTTGGTTCATCATCCCCTTCTTCCAGGTCAACCAATCAGAACATGTATTGGAGCATGGATGAGATGGATAAAAGTGTTCCAAGGCAGACTAATACAGAGTCCGCGTTAAGCTCTGATAATGAGGAAGGTGAAAAGGAAGCTAATTTTGGTCATGAAAATCTTGATAAAGAAGCAGAAGATAATGAGTGCAATTCTGAGAATGAATTTAGCTTAAAGGAAGATTCACAACTTTTAACAAACCATGGTAATGAATCTACTAACTTGGATATGGATAGAAAACATGATGTAGCAATGGAAGCTAAGGTTGGAAAGGATGTTCCAACTACAACTTTCAATCCAACTTCTGATAATATGGACGATCCAGTTGGAGTTCCACCTGAGTGGACCCCACCTAACGTGACTGTTCCTATTTTGAATTTGGTTGACAATGTCTTTCAGCTTAAGAAAAGAGGTTGGTTAAGAAGACAGGTCTTTTGGATTTCAAAACAGATATTACAGGTGGTGATGGAAGATGCTATTGATGATTGGATCCTAAGTGAGATTCATTGGCTTCGCAGAGAGGATACCATTGCCCAAGGGATTCGGTGGGTCCAAGATATCCTCTGGCCTGGTGGTACATTTTTTTTAAGAATACAGACCCCTCAGGTGTTCATTGGTGGTGGCAGTGCATATGATCAAAAGCCTTTACCAAGCATAAGTGAATCTGGTGGAAGCAAGATGACCAAATCACAGTCAGGATCTTTTGAGCTACAGCTTGAGGCTATTCGTAGAGCAAGTGACTTGAAGAAATTTCTCTTTGATGGAGCTCCAGCAGCTTTAGTTGGCTTAATTGGTCAGAAGCAGTACAAACGTTGTGCCAGTGATATATATTACTTTACTCAGTCTTCTATATGTGTGAAGCAACTTGCTTATGCAATACTTGAACTTCTACTTATATCCATCTTTCCTGAGTTGCGGAATGTTGTCATTAGTATTCATGAGAACAACCTGTATAGAGTTCCTTAA 2958 0.4101 MGPITPTPTMDIINDLIEEAKLRLLWWALCIFAISYFFTHTSKSMWMNLPMSILFVAALRILLNKVEFRWKVQPPRLQTYLSHLEKNQLPLNDERLSSSPPPPPPKWKKIDSPVVEAALNDFIDQILKDFVINMWYSDLTPDMEFPELIRDLIMDAISEVSVRVKEINLVDLLTRDIVDLIGDHIDLFRRNQDAIGVDVMLTLSSEERDERLKFHLLNSKELHPALISPESEYKVLQRLMSGILATVLRKREAQCPVIRCIAREILTCLILQPIMNLASPAYINELIESLLLVLNDDGINWMAALEHSTNTTHNHGHSDAGGGHDNHTASADWAQMLEAASQRRTEVLMPENLENMWARGRNYRRKQHKNTKTGYQDPSLKCPAIDAIQEGMGAMHYVGSDPHLNVVGTNRSESSPDPDKELCSEVDHHVDEVKDIRDIPSKKFKDLKRSNSACLLGNQPLLKVCSPRSEVHNPESEKHGEGYRGKSGSEMVVRRDGHSVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGLEKTWFVRRRYRNFERLHRHLKDIPNYLLHLPPKRIFSSSTEDAFVYQRCIQFDKYLQDLLSIANIAEQHEVWDFLSVSSKNYSFGKSSSMMRTLAVNVDDVVDDIVRQFKGVSDGLIRKVVGSSSPSSRSTNQNMYWSMDEMDKSVPRQTNTESALSSDNEEGEKEANFGHENLDKEAEDNECNSENEFSLKEDSQLLTNHGNESTNLDMDRKHDVAMEAKVGKDVPTTTFNPTSDNMDDPVGVPPEWTPPNVTVPILNLVDNVFQLKKRGWLRRQVFWISKQILQVVMEDAIDDWILSEIHWLRREDTIAQGIRWVQDILWPGGTFFLRIQTPQVFIGGGSAYDQKPLPSISESGGSKMTKSQSGSFELQLEAIRRASDLKKFLFDGAPAALVGLIGQKQYKRCASDIYYFTQSSICVKQLAYAILELLLISIFPELRNVVISIHENNLYRVP 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00234 985 Pfam PX domain 532 608 IPR001683 GO:0035091
Viun2g00234 985 Pfam PXA domain 112 290 IPR003114 -
Viun2g00234 985 SUPERFAMILY PX domain 503 610 IPR036871 GO:0035091
Viun2g00234 985 MobiDBLite consensus disorder prediction 689 720 - -
Viun2g00234 985 MobiDBLite consensus disorder prediction 468 490 - -
Viun2g00234 985 PANTHER PX SERINE/THREONINE KINASE PXK 108 979 - -
Viun2g00234 985 MobiDBLite consensus disorder prediction 674 688 - -
Viun2g00234 985 MobiDBLite consensus disorder prediction 470 490 - -
Viun2g00234 985 SMART PX_2 499 609 IPR001683 GO:0035091
Viun2g00234 985 Pfam Sorting nexin C terminal 803 947 IPR013937 -
Viun2g00234 985 ProSiteProfiles PXA domain profile. 112 291 IPR003114 -
Viun2g00234 985 MobiDBLite consensus disorder prediction 674 739 - -
Viun2g00234 985 SMART PXA_3 112 295 IPR003114 -
Viun2g00234 985 MobiDBLite consensus disorder prediction 721 736 - -
Viun2g00234 985 ProSiteProfiles PX domain profile. 501 613 IPR001683 GO:0035091
Viun2g00234 985 Gene3D - 504 618 IPR036871 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00234 Viun-Chr2 4472334 4508487 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00234 K17925 - gmx:100804013 1560.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00234 2 4472334 4508487 Viun2g00234 2 4472334 4508487 ECH