Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00226 ATGGCTTCTCTTCTGAGAAAGTTAAGGCCTTCTTCTGCGCCTGTTGCTGCCGTGAAAACTGAAGACAGCATAAACAGCAGCTATGAGTACTCCATTGCCATGGTCTACAATGGCCCTCCTCTCTGTTACTCCATTCCTGAAATTCCTGCTTTCAAAATCGACCAAATTCCAGTTGCAACCATTGCTTCTCTCTCTCACGATGACTTCTCTGTCCCAGTAATCCAACCTCTCAGCAAAAGCCTTAACAAGAGGAAGCAGAACCCGTGCTCACCAGATTCTGCTGTTCCTCAAAACTTGGATTCTCGTACGATTGATTCACCCGCACTTCTGTCTGGTACTGATGGTGATGATGATATGCACGAGAGTTTGGAGACTTTGAAAGTTCCCTGTGCTAGAGATGGCGCCATTCTTAACATAACTTTGGACACCACAGAATCAGGTCCAGGTTCAGGTTCAGGTTCAACCTCTCTTTTTGCTTCCTCTGATGGGATTTGTTCTTTGGGAGAAGAGGAGCAAGCAACAAGTCCGAAGCATGTGAAGCGTGTTTCTGCCGTGACCTTCTGTGATCCTGAGTCAAACTACATGGAGAGCGATAGTGATGAGTTTGGTGATTCTCAGGTTGAGAGTGTTCCTGTGATGGAACGCGCAGTGAGACCTGGGAAGAAGGGTTCTTGCTATAAGTGCCTAAAGGGGAACCGATTCACACCGAAGGAGGTTTGCATTGTTTGCAGTGCAAAGTATTGTCGCAGCTGTGTGGTGAGGGCCATGGGGTCCATGCCACAGGGACGAAAATGTGTGACTTGCATTGGATACAGAATTGATGAAAGAAAAAGGAGGAAACTGGGGAAATCTTCGCGGATGATGAAGCAGTTGCTTTCTGAGTTGATTGTGTCTGAAGTCATGGATAATGAAAAGTCTTGTGAAGAAAATCAAATACCACCAGAGCTTGTTTTTGTCAACTCACAACCTCTGGATCGGGAACAGCTTTTGTTGCTTCTGAATTGTCGAAATCCACCAAAACATCTTAAACCAGGATCCTATTGGTATGATAAAGCATCTGGATTTTGGGGAAAGGAAGGTCAACCACCCAGTGAGGTTATCAGCCCCCAGCTGGTTGTTGGAGGTCGCTTGGACAAGTATGCAAGCAATGGAGACACAAATGTGATTATAAACGATCGCCTGATTACAAAAAAGGAGTTATGGGTACTGAAGTTGGCTGGAGTGCCGTGTGAGGGAACACCAAACTTTTGGGTGAACGCTGATGGATCATACAGGGAAGAGGGACAGAAGAATGATAGGGGGTGTATATGGGAAAAGCGCACAGCAAGGTTGGCTTGTGCAGTTCTGTCTTTGCCAGTTCCTTCTAAGTCTGCAACTCTTTCTTGTGAAGGTGAAACACCAAACAAAGACAGTCTTCCTCGGAAAATACTTCACAAATTTCTACTTGTTGGTTCTGTCAATTCTGGTGCATGTACTATATTTAAACAGGCCAAGCTTCTGTATAATGTGCCTTTCTCTGAAAATGAGCTCGAAAATATCAAGTTGGTGATCCAAAGCAACCTGTTTTCCTACCTTGGTATTCTGCTGGAGGGGCGTGCAAATTTTGAAACTGAGTTTTTGTTGAAGAATAGGAGAGAAAGGCCTGTGGCTGAATCCACTTCATCAGCAGAGAATATCAGCAGTGATGAAGTTGAAACAACTCCCTATTCCATTGGCCCACGACTGAAAGCTTTCTCAGATTGGCTACTGAAATACATGGTGTCAGGTAACCTTGATGCAATATTTCCTGCTGCTATACGTGAATATGGACCACTTGTGGAAGGTGTGTGGAAGGACAAAGCCATTCAAGCAACGTATGACAGGCGAAATGAACTAGAAATGCTACCTAGAAGTGCAAACTATTTTCTGGACCGGGCTGTTGAAATTTCCAAGACAGACTACAAGCCATCTGATATGGACATCTTGTACGCTGAGGGCATATCGTTACCCAAAAGCCTCACTTCAATGGAATTTTCTTTTCCTAAATTAAGCACTGAGGACTCTTTGCATGCTGATTATCAACATGACTCTTCTCTCAGATACCAATTGATCAGATTACATCCTAAAAGCCTTGGACCGAAGTGCAAGTGGTTGGAGATGTTCGAAGACACGGATGTTGTAATATTCTCAGTTGCTTTATCTGACTATGATGAGTACATTACAGACAGTGAAGGTGTTTCTACAAACAAAATGATGGTAGCTAAGGCTCTCTTTGAAAACATCATTGCACACCCAGCCTTTCATAACAAAAAATTTCTCCTAGTACTGACCAAATTTGATCTACTTGAGGAAAAGATTGAAGACGTTCCTCTACGGAAATGTGAATGGTTTAGTGATTTCAAACCATTTATCAGTCCCAATATGAAGAAAGGTTGTAGCAATGGCAATAACCCTTTGTTAGCTCAATCTGCTTTTCAATACATTGCTGTCAAGTTCAAGAGATTGTTCCACTCTCTCACTCACCGAATTCTCTTTGTTTCACTGGTTAATGGGTTGGAACCTGATACTGTTGATGAAGCTCTCAGAAATGGAAGGGAGGTCATGGAGTGGGAAAAATGGGACCCCTCTATTGTAACAGATCCAAAGTCAGAGATTACATCAACAAGCATTGAGGAGCCAAGTTACACATAA 2670 0.4341 MASLLRKLRPSSAPVAAVKTEDSINSSYEYSIAMVYNGPPLCYSIPEIPAFKIDQIPVATIASLSHDDFSVPVIQPLSKSLNKRKQNPCSPDSAVPQNLDSRTIDSPALLSGTDGDDDMHESLETLKVPCARDGAILNITLDTTESGPGSGSGSTSLFASSDGICSLGEEEQATSPKHVKRVSAVTFCDPESNYMESDSDEFGDSQVESVPVMERAVRPGKKGSCYKCLKGNRFTPKEVCIVCSAKYCRSCVVRAMGSMPQGRKCVTCIGYRIDERKRRKLGKSSRMMKQLLSELIVSEVMDNEKSCEENQIPPELVFVNSQPLDREQLLLLLNCRNPPKHLKPGSYWYDKASGFWGKEGQPPSEVISPQLVVGGRLDKYASNGDTNVIINDRLITKKELWVLKLAGVPCEGTPNFWVNADGSYREEGQKNDRGCIWEKRTARLACAVLSLPVPSKSATLSCEGETPNKDSLPRKILHKFLLVGSVNSGACTIFKQAKLLYNVPFSENELENIKLVIQSNLFSYLGILLEGRANFETEFLLKNRRERPVAESTSSAENISSDEVETTPYSIGPRLKAFSDWLLKYMVSGNLDAIFPAAIREYGPLVEGVWKDKAIQATYDRRNELEMLPRSANYFLDRAVEISKTDYKPSDMDILYAEGISLPKSLTSMEFSFPKLSTEDSLHADYQHDSSLRYQLIRLHPKSLGPKCKWLEMFEDTDVVIFSVALSDYDEYITDSEGVSTNKMMVAKALFENIIAHPAFHNKKFLLVLTKFDLLEEKIEDVPLRKCEWFSDFKPFISPNMKKGCSNGNNPLLAQSAFQYIAVKFKRLFHSLTHRILFVSLVNGLEPDTVDEALRNGREVMEWEKWDPSIVTDPKSEITSTSIEEPSYT 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00226 889 SUPERFAMILY FYVE/PHD zinc finger 201 269 IPR011011 -
Viun2g00226 889 SUPERFAMILY Transducin (alpha subunit), insertion domain 505 657 IPR011025 GO:0007165
Viun2g00226 889 ProSiteProfiles G-alpha domain profile. 476 872 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g00226 889 Gene3D - 506 658 IPR011025 GO:0007165
Viun2g00226 889 FunFam Extra-large guanine nucleotide-binding protein 3 506 658 - -
Viun2g00226 889 FunFam Guanine nucleotide-binding protein subunit alpha 690 803 - -
Viun2g00226 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 475 848 IPR027417 -
Viun2g00226 889 Gene3D - 660 867 IPR027417 -
Viun2g00226 889 MobiDBLite consensus disorder prediction 81 116 - -
Viun2g00226 889 PANTHER OS01G0977800 PROTEIN 16 388 - -
Viun2g00226 889 Pfam G-protein alpha subunit 476 859 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g00226 889 SMART galpha_1 454 855 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g00226 889 MobiDBLite consensus disorder prediction 81 108 - -
Viun2g00226 889 PRINTS Alpha G protein (transducin) signature 765 774 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g00226 889 PRINTS Alpha G protein (transducin) signature 479 494 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun2g00226 889 PRINTS Alpha G protein (transducin) signature 717 745 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00226 Viun-Chr2 4408021 4412549 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00226 - - gmx:112997598 1379.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00226 2 4408021 4412549 Viun2g00226 2 4408021 4412549 ECH