Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00218 ATGCCAGAGACTTTCACTGTGAAGGTTGAAGAGGGAAGGCCTGCAACTGATGGAAACCCATCAGCAGGTCCTGTCTATAGGAGCATTTATGCCAAAGATGGTCTCTTGGAGGTTCCTTCTGATTTGGAATCACCCTGGGATTTCTTCAGGAACTCTGTTAAGAGGAATCCCAACAGCAAAATGCTTGGTAGGCGTCAAAAAACAGAATCTAAGGCGGGTTCCTACATATGGCTTACATATCAAGAGGTTTATGATGCTGCCTTGAGAATGGGTTCTGCCATGAGGAGCCGTGGGCTCAATCCAGGAGATCGTTGCGGCATATATGGGTCCAACTGCCCTGAATGGATCATTGCCATGGAGGCTTGCAACAGCTGTGCAGTGTCATATGTTCCCTTATATGACACCCTTGGTCCTAACGCGGTGGAGTTTATCATAAATCATGCTGAAGTTTCAATTGCATTTGTTCAGGAGAAAAAAATTCCATCAATTTTGTCATGTCTTGCGCAGTGTTCTTCAAATCTTAAAACTATTGTGAGCTTTGGAAGTGTTTCGACCACACAAAAGAAGGAAGCTGAGGAGCATGGTGTGTCCTGCTTCTCATGGGATGAGTTTCTTCAGTTGGGATGTCTGGATTGGGATTTACCCTCGAAAAAAAAGACAGACATTTGCACAATAATGTACACAAGTGGAACAACTGGAGATCCCAAAGGTGTGGTAATTAAGAATGAGGCTTTCATGGCTGAAGTGTTGTCTGTTGACGACATACTTATGTTAACAGACAGAGTGGCAGCAGAAGACGATGTGTACTTCTCCTTTCTTCCTCTTGCTCACGTATATGACCAAATAATGGAGACCTATTGCATCTCCAAGGGTTCATCAATAGGATTTTGGCAAGGAGATGTCAGGTTTTTGCTGGAAGATGTTCAGGCACTGCAACCAACTATGTTTTGTGGTGTTCCTAGAGTTTATGATCGCATTTGTGCTGGTATCAAAAGCAGACTTTCTTCAGCAGGAGTACTGCGGAGTACATTGTTTCAGTGTGCTTACAACTACAAGCTAAAATATCTGGAGAAGGGTCTTCCACAACACAAAGCAGCGCCTCTATTCGATAAGCTTGTGTTTGACAAGACAAAACAAGCACTGGGTGGACGTGTTCGCATCCTGTTATCAGGGGCTGCTCCTTTGCCTAGGCATGTGGAAGAGTTTATGAGAGTCACTAGTGGATCTACATTATCACAAGGATATGGTCTTACTGAAAGTTGTGCTGGGTGTTTCACTGCCATAGGTGATGTGTATTCTATGACAGGAACAGTTGGGGTTCCCATGACAACCACTGAAGCCAGGCTTGAATCTGTGCCAGAGATGGAATATGATGCACTTTCCAATGTACCCCGAGGAGAAATTTGTCTGAGAGGAAACACCTTGTTCTCTGGTTATCACAAGCGCGAAGATCTGACCAAAGAGGTTATGGTTGATGGTTGGTTTCACACAGGAGACATTGGAGAGTGGCAACCAAATGGAGCCATGAAAATTATTGATAGGAAGAAAAATATCTTCAAATTATCTCAAGGAGAATATATTGCTGTGGAGAATATTGAAAACAAGTACTTGCAGTGCCCCCTTATAGCATCGATTTGGGTGTATGGAAACAGCTTTGAGTCGTTCTTGGTGGCTGTTGTGGTCCCTGAAAGAAAGGCCATTGAGGATTGGGCAATATTGCACAATGTGAGTGATGATTTTAAATCATTATGTGACAATCTAAAAGCAAGAAAGTACATTTTGGATGAACTCAACAGCACTGGTCAGAAACTCCAACTCAGAGGATTTGAGCTGCTAAAAGCCATTCACCTGGAGCCAAATCCCTTTGACGTGGAGAGAGATTTAATAACTCCAACATTCAAATTGAAGAGACCACAACTGCTCAAGTACTATAAGGATCACATTGATCAACTATACAAAGAAGCAAAGGGAGCAATGCAGTGA 1983 0.4317 MPETFTVKVEEGRPATDGNPSAGPVYRSIYAKDGLLEVPSDLESPWDFFRNSVKRNPNSKMLGRRQKTESKAGSYIWLTYQEVYDAALRMGSAMRSRGLNPGDRCGIYGSNCPEWIIAMEACNSCAVSYVPLYDTLGPNAVEFIINHAEVSIAFVQEKKIPSILSCLAQCSSNLKTIVSFGSVSTTQKKEAEEHGVSCFSWDEFLQLGCLDWDLPSKKKTDICTIMYTSGTTGDPKGVVIKNEAFMAEVLSVDDILMLTDRVAAEDDVYFSFLPLAHVYDQIMETYCISKGSSIGFWQGDVRFLLEDVQALQPTMFCGVPRVYDRICAGIKSRLSSAGVLRSTLFQCAYNYKLKYLEKGLPQHKAAPLFDKLVFDKTKQALGGRVRILLSGAAPLPRHVEEFMRVTSGSTLSQGYGLTESCAGCFTAIGDVYSMTGTVGVPMTTTEARLESVPEMEYDALSNVPRGEICLRGNTLFSGYHKREDLTKEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPERKAIEDWAILHNVSDDFKSLCDNLKARKYILDELNSTGQKLQLRGFELLKAIHLEPNPFDVERDLITPTFKLKRPQLLKYYKDHIDQLYKEAKGAMQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00218 660 Gene3D - 34 514 IPR042099 -
Viun2g00218 660 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 652 - -
Viun2g00218 660 Pfam AMP-binding enzyme 52 522 IPR000873 -
Viun2g00218 660 CDD LC-FACS_euk 73 653 IPR045311 GO:0004467|GO:0006631
Viun2g00218 660 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Viun2g00218 660 MobiDBLite consensus disorder prediction 1 23 - -
Viun2g00218 660 SUPERFAMILY Acetyl-CoA synthetase-like 41 654 - -
Viun2g00218 660 Pfam AMP-binding enzyme C-terminal domain 532 583 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00218 Viun-Chr2 4260611 4267168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00218 5 656 Acyl Lipid Metabolism Gene Families AT1G64400 56.422 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00218 K01897 - gmx:100779735 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00218 2 4260611 4267168 Viun2g00218 2 4260611 4267168 ECH