Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00069 ATGGGTTTGGAAGTAGAAGAACCAATAACAACAACATCACAATTCACAGCACCAGAAACGATGTCGTTGAGTTCACCGCAAAAAATTCAAAACAACTTGACCGTTACATCCACGCTCCCAATCGTGCAGCCTCACGCGCTTCTCCCAAAGCCAGTGCCCCCAACCGCATCACTCCGAAACGACGTCACGGTTTCCTCTGCATTTGGCAAGTTCTTTCACCAGCGCCGCCATGAGCTGTCTTCTGCGATCTCGCGAGGGATCTCCACTCTTAAGCCCCAAAACGATGATGCTTTGAAGAAGAACAAGAACGAAGGCGTGACGGAGTTCAACCTCTCGGGACTGAAAGTCTTTGTGGCGGTAAAAAAGAACGAATCGTTCTCACAGCGCCGTATCAGCTTCTTCTCGCGCTCAAACTGCAGAGAATGCGGCGCAGTGCGGACCTTCTTCAGAGAGAGAGCGGTGAGGTTCGTGGAGATAAATGTGGACGTGTTCACGGAACGGGAGAAGGAATTGAGGGAGAGAACGGGGAGCACGACGGTGCCGAAGATTTTCTTTGGTGAAAAGCTGATAGGAGGGCTGGTGGAGCTCAACGCACTGCGGAAGGATGGCAACAAGGAGTTGGAGAGGCAATTGAAAGAAGCAGAAGGAGAGGGGCCGGCGGCTCCGGTGTACGGGTTCGACGAAGCGGCGGAGGAAGCAGTGAAGGAAGAAGCGGCCGAGGAGACTTTGAAGGTAGTTAAGGTTTTGAGGCAGAGGTTGCCAATTCAGGACAGGTTGTTGAAAATGAAGATTGCGAAGAACTGCTTTGCAGGGAGCGAGTTGGTGGAGCTTCTGGTTCGCAACCATGGCTACGCTCCAACCAAGGCTGTTGAGATTGGAAAACAGTTATGCAAGAAGCACTTCATCCATCATGTTTTCGGGGAAAATGATTTCGAGGAGGGAAACCACTTCTATAGATTCATTGAGCACGAACCCTTAATCTCCAAATGCTTTAACTTCCGTGGTGCCACAAATGATAGTGAACCAAAGTCTGCAGCTGCAGTGTGTGATAGGCTCACCAAGATTATGTGTGCTATTCTTGAGTCTTATGCATCTGAAGACAGGCAACGTGTTGATTATGTGGGCATTAGCAAAAGCGAAGAATTTCGTAGGTATGTAAACATGACCCAAGATCTGCAGCGGGTGAATCTCTTGGAGCTATCAGAAAACGAGGCACTTGCCTTCTTCTTAAATTTGTACAATGCTATGATCATCCACGCTGTCATTAGAGTTGGGTGTCCTGAAGGTGTGATTAATAGGAGATCCTTCTCTGAGTTCCATTATTTGATTGGAGGGCACCCTTATTCTCTTAGTGCTATTAAAAATGGAATCCTCAGAAGCAATCGGAGGTCACCATATTCCTTAATCAAGCCCTTTGGCTCAGGTGACAGGCGCTTAGAGCTTGCTCTTGTAAAACTGAATCCTTTAGTTCACTTTGGCCTTTGTAATGGCACGAAGTCGAGCCCAAAGGTGAAGTTTTTCTCACCCTATAGAGTAGCAGAAGAGTTGAGATGTGCAGCTAGAGAGTTTTTTGAGAATGATGGAATTGAAGTGGATTTGGAGAAGAGAACGATTCATCTCAATATAATTTTCAAGTGGTACTCTGGGGATTTCGGACAGGAGAAGAACATGTTAAAGTGGATAATTAATTACTTGGATGCAAATAAAGCAGGTCTTTTGACACATCTCTTAGGTGATGGTGGTCATGTTAATGTCTCCTATATGAGTTATGATTGGTCAATAAATTCCTGA 1791 0.4657 MGLEVEEPITTTSQFTAPETMSLSSPQKIQNNLTVTSTLPIVQPHALLPKPVPPTASLRNDVTVSSAFGKFFHQRRHELSSAISRGISTLKPQNDDALKKNKNEGVTEFNLSGLKVFVAVKKNESFSQRRISFFSRSNCRECGAVRTFFRERAVRFVEINVDVFTEREKELRERTGSTTVPKIFFGEKLIGGLVELNALRKDGNKELERQLKEAEGEGPAAPVYGFDEAAEEAVKEEAAEETLKVVKVLRQRLPIQDRLLKMKIAKNCFAGSELVELLVRNHGYAPTKAVEIGKQLCKKHFIHHVFGENDFEEGNHFYRFIEHEPLISKCFNFRGATNDSEPKSAAAVCDRLTKIMCAILESYASEDRQRVDYVGISKSEEFRRYVNMTQDLQRVNLLELSENEALAFFLNLYNAMIIHAVIRVGCPEGVINRRSFSEFHYLIGGHPYSLSAIKNGILRSNRRSPYSLIKPFGSGDRRLELALVKLNPLVHFGLCNGTKSSPKVKFFSPYRVAEELRCAAREFFENDGIEVDLEKRTIHLNIIFKWYSGDFGQEKNMLKWIINYLDANKAGLLTHLLGDGGHVNVSYMSYDWSINS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00069 596 ProSiteProfiles DEP domain profile. 249 322 IPR000591 GO:0035556
Viun2g00069 596 SUPERFAMILY Thioredoxin-like 124 212 IPR036249 -
Viun2g00069 596 Coils Coil 193 217 - -
Viun2g00069 596 Coils Coil 587 596 - -
Viun2g00069 596 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 253 320 IPR000591 GO:0035556
Viun2g00069 596 SMART DEP_3 249 322 IPR000591 GO:0035556
Viun2g00069 596 Pfam Glutaredoxin 133 190 IPR002109 -
Viun2g00069 596 ProSiteProfiles Glutaredoxin domain profile. 119 218 - -
Viun2g00069 596 CDD DEP 243 319 - -
Viun2g00069 596 PRINTS Glutaredoxin signature 131 149 IPR014025 -
Viun2g00069 596 PRINTS Glutaredoxin signature 187 200 IPR014025 -
Viun2g00069 596 PRINTS Glutaredoxin signature 173 186 IPR014025 -
Viun2g00069 596 Pfam Protein of unknown function, DUF547 399 523 IPR006869 -
Viun2g00069 596 Gene3D Glutaredoxin 125 215 - -
Viun2g00069 596 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 31 595 - -
Viun2g00069 596 SUPERFAMILY "Winged helix" DNA-binding domain 241 338 IPR036390 -
Viun2g00069 596 Gene3D - 235 371 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00069 Viun-Chr2 1498226 1502901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00069 - - pvu:PHAVU_003G007200g 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g00069 2 1498226 1502901 Viun2g00069 2 1498226 1502901 ECH