Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03565 ATGGAGATGCGAGGCATAATTTTGGGGGTGTTGATGAGCCTGGTGGTGATGGTGCGGGGTGAAGACCCTTATATCTACCATACATGGAACGTTACCTATGGCATCATCTCTCCGTTGGGAGTACCGCAGCAAGGCATTCTCATCAATGGCAAATTCCCAGGACCCAGTATTAATACAACCAGCAATAACAATCTAATAGTCAATGTCTTCAATAATCTTGACGAGCCTCTTCTTTTTACATGGAGTGGCATCCAACAGAGAAAGAATTCGTGGCAAGATGGGGTACCCGGAACAAACTGCCCCATTCCTCCAGGGACAAACTTCACGTATCGTATGCAGGTGAAGGACCAGATAGGTAGTTTCTTCTATTACCCGAGCACAGCGTTGCACAGGGCAGCTGGTGGTTTTGGGTCGCACCGTATAAACAGCAGGTTGCTGATTCCAGTGCCGTACCATGATCCCGAGGACGAATACGACGTTGTGATCGGTGACTGGTACACAAAGAGCCACACCACTCTGAGGAAGTTCTTGGATAGCGGTCGCTCCATTGGGAGGCCTGAAGGTGTTCTAATCAACGGCAAAACGGCTAAAGGTGATGGAAGTGACGAGCCACTGTTCACCATGAAGCCTGGAAAGACCTACAAATACCGAGTATGCAACGTAGGAATGAAATTTTCACTCAACTTCAGGATCCAAGGCCACCCGTTGACGGTTGTTGAGATGGAAGGCTCCCATGTGGTGCAAAACCAATACGAGTCTCTGGACGTCCATATAGGTGGTTGCTTCTCTCTCCTTGTCACAGCAGACAAGGACCCAAAGGATTACTACATGGTGGCTTCCACGCGCTTCAGCAAGACTGTTCTCACAGCCAAAGGCATCATCCGTTACACAAATAGCAAGAGTGGTCCCTCTCCTGACATCCCGGAGGCTCCAGTCGGCTGGGCTTGGTCTCTCAATCAATTCCGTTCCTTCCGCTGGAATCTCACTGCCAGCGCCGCCAGGCCCAACCCTCAGGGTTCCTACAAATACGCCAAAATCGAAATTACCCGTACCATCAAGCTCGTCAACTCCGTCAGTAGGGAAAACGGTAAGCTTCGCTATGCCCTCAATGGTGTCTCCCACGAAGACCCCGAAACTCCAGTCAAGCTAGCTGAATACTTTGGAGTTGCTGACAAGGTTTTCAAATATAATACTATCAAAGACGACCCATCCTCTGACGTTGGAGCCTCTGTTAAAATTCATCCAAATGTTCTCAATCTTGAACATCGTAAATTCATCGAGATCATCTTTGAGAACCCTGAAAAATCAATCCAGTCATATCACATAGATGGTTATGCATTCTTCGCTGTCGCCATAGAGCCTGGCAAATGGACCCCAGATAAGAGGGACAACTACAACCCTCTCGATGCCGTCAACAGGCACACAATTCAGGTCTTCCCAAAATCTTGGGCCGCCGTCTTGTTGTCAACCGACAACGTTGGAATGTGGAACTTGAGATCGATGATTACTGAAAATATGTATCTTGGCCAACAGATGTACTTGAGCATTATCACCCCGGAGCGTTCTCTCAGAGACGAGTACAATATTCCGGATAACGCCTTACTTTGCGGTATTGTTAAGGATTTGCCAAAGCCACCACCATATACCTAA 1650 0.4818 MEMRGIILGVLMSLVVMVRGEDPYIYHTWNVTYGIISPLGVPQQGILINGKFPGPSINTTSNNNLIVNVFNNLDEPLLFTWSGIQQRKNSWQDGVPGTNCPIPPGTNFTYRMQVKDQIGSFFYYPSTALHRAAGGFGSHRINSRLLIPVPYHDPEDEYDVVIGDWYTKSHTTLRKFLDSGRSIGRPEGVLINGKTAKGDGSDEPLFTMKPGKTYKYRVCNVGMKFSLNFRIQGHPLTVVEMEGSHVVQNQYESLDVHIGGCFSLLVTADKDPKDYYMVASTRFSKTVLTAKGIIRYTNSKSGPSPDIPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYKYAKIEITRTIKLVNSVSRENGKLRYALNGVSHEDPETPVKLAEYFGVADKVFKYNTIKDDPSSDVGASVKIHPNVLNLEHRKFIEIIFENPEKSIQSYHIDGYAFFAVAIEPGKWTPDKRDNYNPLDAVNRHTIQVFPKSWAAVLLSTDNVGMWNLRSMITENMYLGQQMYLSIITPERSLRDEYNIPDNALLCGIVKDLPKPPPYT 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03565 549 Gene3D - 25 145 IPR008972 -
Viun1g03565 549 Pfam Multicopper oxidase 31 144 IPR011707 GO:0005507
Viun1g03565 549 Pfam Multicopper oxidase 159 298 IPR001117 -
Viun1g03565 549 CDD CuRO_2_AAO_like_1 156 296 IPR034271 -
Viun1g03565 549 SUPERFAMILY Cupredoxins 152 335 IPR008972 -
Viun1g03565 549 Gene3D - 343 542 IPR008972 -
Viun1g03565 549 Pfam Multicopper oxidase 383 520 IPR011706 GO:0005507|GO:0016491
Viun1g03565 549 SUPERFAMILY Cupredoxins 21 171 IPR008972 -
Viun1g03565 549 CDD CuRO_1_AAO_like_1 25 142 IPR034273 GO:0005507
Viun1g03565 549 Gene3D - 153 334 IPR008972 -
Viun1g03565 549 PANTHER MULTI-COPPER OXIDASE 43 516 IPR045087 -
Viun1g03565 549 SUPERFAMILY Cupredoxins 346 536 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03565 Viun-Chr1 42013945 42016121 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03565 K00423 - gmx:100782413 916.761