Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03542 ATGGGAATGTTGGTGGCAGTGACTGTTACAGTTACAGTTACGGCAATGGTAATGGAGATGGTGGGAGGAGGGAGTTGGTGCGTGGCAAAGATTGGAGTGAGCGAGGAAGTACTGCAGAGAGCATTGGACTCTGCATGTGGAGGAGATGGCGGAGCCGATTGCGCTCCCATTCAGCCCAACGGCCTTTGCTTCTCTCCCAACACCCTTCAAGCTCACGCTTCCTACGCCTTCAACAGCTTTTACCAGCGAAACGGAAGAGCTTCTAACGCCTGCCTCTTCGAGGGCGCCTCCACCATCGCCCAAACAGATCCCAGCTATGGATCTTGCGTCTACCCGTCCTCCTCCGCAATCGCAACTCCAACCGCCAGTACCGCTGAAGTTACAAATACAACAGTGCCAACACCTTCCTCAACAAGAACTACTCCGATCCAAGGCGGGGATGATGCAGGAGTGAACCCTCAAATCCCTCAAAATTCTACTCCAACTTCAAACACAATACCCTCATCTTGTTTACTCTTTCTTCTCGCTCTGTTCCTAGGAGACACTTTTTTTGTAGTGTAG 561 0.5152 MGMLVAVTVTVTVTAMVMEMVGGGSWCVAKIGVSEEVLQRALDSACGGDGGADCAPIQPNGLCFSPNTLQAHASYAFNSFYQRNGRASNACLFEGASTIAQTDPSYGSCVYPSSSAIATPTASTAEVTNTTVPTPSSTRTTPIQGGDDAGVNPQIPQNSTPTSNTIPSSCLLFLLALFLGDTFFVV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03542 186 Pfam X8 domain 26 97 IPR012946 -
Viun1g03542 186 Gene3D - 19 138 - -
Viun1g03542 186 SMART X8_cls 25 111 IPR012946 -
Viun1g03542 186 PANTHER BETA-1,3 GLUCANASE 15 129 IPR044788 -
Viun1g03542 186 MobiDBLite consensus disorder prediction 122 162 - -
Viun1g03542 186 FunFam Glucan endo-1,3-beta-glucosidase 4 20 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03542 Viun-Chr1 41939992 41942523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03542 17 113 Glycoside Hydrolase AT2G05790 52.577 1.65e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03542 - - var:108320750 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03542 1 41939992 41942523 Viun1g03542 1 41939992 41942523 ECH