Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03541 ATGAGTACTGAAATGGGTTGTTGGGTGAGATTGTGTTTGTCAGTGTTGTACTTCTCACTAAGTTCAGTGATTGTTGATGCTGACAATGGTGACTATGAAGTTCCCATCCCAAGCACTCTGGATGGACCCTTCAAGCCTGTCACCGTTCCTCTTGACCAGACCTTCCGAGGAAACGCCATGGATTTGCCACACACCGATCCTCTGCTTCAAACAACCGCTCAAGGCTTCCAACCACAACAAATATCTCTCTCCCTCTCCTCTTCTCATCACTCTGTTTCCATCTCTTGGATTACAGGGGAATTCCAAATTGGGGACAACATAGAACCCTTAGATCCTAAAAGTGTTGCGAGCTTAGTTCGATATGGAAGGTTCCGAAGGTCCATGAGTCACCGAGCTACGGGTTATTCCCTCGTTTACAGTCAACTTTATCCTTTTGAAGGCCTTCAGAACTATACCTCTGGAATCATACATCACGTTCGTCTCACAGGTCTGAGACCCAACACACTCTATCAATATCAATGCGGAGATCCTTCTTTGTCAGCAATGAGTGATGTTCATTACTTCAGGACTATGCCAGTTTCTAGTCCCAAGAGCTACCCTAACAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATACAATACCACATCCACTGTTGACCACATTATCAGTAACCATCCCGATCTTATTTTGTTGGTTGGAGATGTTACTTATGCCAATCTATATCTAACTAATGGTACTGGGGCAGACAGCTATTCTTCCGCCTTTCCTGACACTCCCATCCATGAAACCTATCAACCTCGTTGGGATTACTGGGGAAGGTACATGCAGCCTCTGATTTCCAGTGTCCCTATAATGGTAATAGAAGGGAATCATGACATAGAACTACAAGCTGAAAACCAGACATTTGTTGCTTATAGTTCTCGATTTGCTTTCCCATCAGAAGAGAGTGGATCATCATCCACTTTATATTATTCTTTCAATGCAGGAGGGATACATTTTATAATGCTCGGCTCCTACGCATTGTATGACAAATCAGGGGACCAGTACATGTGGCTGGAGAGGGACTTGGCTTCTGTTGACAGGGAAGTAACTCCGTGGTTGGTAGCTACATGGCATGCACCTTGGTACAGCACCTACAAGGCACATTATAGAGAAGCAGAGTGCATGAGGGTAGAGATGGAAGACTTGCTATATAAATATGGCGTTGACATTGTCTTCAATGGACATGTTCATGCGTATGAGAGATCAAACCGGGTATACAACTACACATTGGATCCTTGTGGTCCTGTTTATATCACTGTTGGTGATGGTGGTAACAGGGAAAAGATGGCGATCAAACATGCTGATGAACCTGGAGAGTGTCCAGAACCATCAACTACACCAGATCCCTTTATGGGTGGCTTCTGCGCCTTTAATTTTACATCCGGCCCAGCTGCAGGTAACTTCTGCTGGGATCGACAGCCTGATTACAGCGCTTTCAGAGAAAGTAGCTTTGGTCATGGCATTTTGGAGGTGAAAAATGAAACCCATGCACTGTGGATCTGGCATCGCAATCAAGACTTTTATGGTAGTGCTGGAGATGAGATTTACATTGTTAGGCAACCTCAAAACTGCCCACCGTTCAAACCAGCTACATGA 1641 0.4485 MSTEMGCWVRLCLSVLYFSLSSVIVDADNGDYEVPIPSTLDGPFKPVTVPLDQTFRGNAMDLPHTDPLLQTTAQGFQPQQISLSLSSSHHSVSISWITGEFQIGDNIEPLDPKSVASLVRYGRFRRSMSHRATGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRPNTLYQYQCGDPSLSAMSDVHYFRTMPVSSPKSYPNRIAVVGDLGLTYNTTSTVDHIISNHPDLILLVGDVTYANLYLTNGTGADSYSSAFPDTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHDIELQAENQTFVAYSSRFAFPSEESGSSSTLYYSFNAGGIHFIMLGSYALYDKSGDQYMWLERDLASVDREVTPWLVATWHAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAIKHADEPGECPEPSTTPDPFMGGFCAFNFTSGPAAGNFCWDRQPDYSAFRESSFGHGILEVKNETHALWIWHRNQDFYGSAGDEIYIVRQPQNCPPFKPAT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03541 546 FunFam Purple acid phosphatase 197 459 - -
Viun1g03541 546 SUPERFAMILY Purple acid phosphatase, N-terminal domain 56 192 IPR008963 GO:0003993|GO:0046872
Viun1g03541 546 Pfam Iron/zinc purple acid phosphatase-like protein C 429 521 IPR025733 -
Viun1g03541 546 PANTHER ACID PHOSPHATASE RELATED 18 537 IPR039331 GO:0003993
Viun1g03541 546 Pfam Purple acid Phosphatase, N-terminal domain 78 190 IPR015914 GO:0003993|GO:0046872
Viun1g03541 546 CDD MPP_PAPs 197 534 IPR041792 -
Viun1g03541 546 Gene3D - 77 193 - -
Viun1g03541 546 SUPERFAMILY Metallo-dependent phosphatases 202 523 IPR029052 -
Viun1g03541 546 Pfam Calcineurin-like phosphoesterase 202 414 IPR004843 GO:0016787
Viun1g03541 546 Gene3D - 197 462 IPR029052 -
Viun1g03541 546 Gene3D - 468 540 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03541 Viun-Chr1 41937178 41939871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03541 62 439 Miscellaneous Gene Families AT1G13900 25.172 4.25e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03541 K22390 - gmx:100784006 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03541 1 41937178 41939871 Viun1g03541 1 41937178 41939871 ECH