Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03521 ATGAAGAACGTGAAGGAGGAGGAGAGTGGTTTCACGCGCCTTGCCTCATTCGTCTGCGATTGTGAACCTTTCACGGAGGAAGAGCTTGAAGGCATCGAAGCTTCTCTTTCCAACCCTAACAACAAACGTCGGTTCGACGATCTCACTCCTCGCCGCCGTCGCTTGCCCGAATCGCTTATCGCTCTTCAACACCCAAATATTTCTTCTTTATCCCGTCGTCCAGGCTATTCAAGAATGAGATTACCAGCAATTAAGTTTAGTGGTCGAATTATGTATAGCAGGACTTTTGATTCTGTACAGAAAGCTGTAGCAAAACTCTTACAAGCCCTGGACGTAAAAAATAGAGAGATTGTGCAATTTGCAATTGGATTTGATATTGAGTGGAAACCTTCCTTCACTAAAGGCGTTCCACCCGGAAAGGTAGCAGTCATGCAGATATGTACTGACAGTAGTCATTGTCATGTTCTACATCTAATTCATTCTGGAATCCCTCCAAATTTACAGCTTTTGCTTGAAGATCCCACAGTTCTGAAGGTTGGAGTTGGGATTGGTAGTGATGCCACGAAGGTTTTTAGAGATTATAAAATATCTGTCAAAGGTGTGACGGATCTTTCTTTCCATGCCAATCAGAAGCTTGGTGGTGATCACAAGTGGGGTCTTTCATCTTTGACCGAAAAACTTTTATCGAAACAGCTGAAAAAGCCCAATAAAATAAGACTGGGAAATTGGGAGACTCCTGTTTTGTCAAAGGAGCAACTAGAGTACGCTGCAACCGATGCTTTTGCTTCTTGGTATCTTTATCACGTACATGCTATTCTGGAATAA 825 0.4291 MKNVKEEESGFTRLASFVCDCEPFTEEELEGIEASLSNPNNKRRFDDLTPRRRRLPESLIALQHPNISSLSRRPGYSRMRLPAIKFSGRIMYSRTFDSVQKAVAKLLQALDVKNREIVQFAIGFDIEWKPSFTKGVPPGKVAVMQICTDSSHCHVLHLIHSGIPPNLQLLLEDPTVLKVGVGIGSDATKVFRDYKISVKGVTDLSFHANQKLGGDHKWGLSSLTEKLLSKQLKKPNKIRLGNWETPVLSKEQLEYAATDAFASWYLYHVHAILE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03521 274 Pfam 3'-5' exonuclease 114 268 IPR002562 GO:0003676|GO:0006139|GO:0008408
Viun1g03521 274 Gene3D - 73 271 IPR036397 GO:0003676
Viun1g03521 274 SMART 35exoneu6 90 274 IPR002562 GO:0003676|GO:0006139|GO:0008408
Viun1g03521 274 SUPERFAMILY Ribonuclease H-like 121 269 IPR012337 -
Viun1g03521 274 CDD WRN_exo 122 268 - -
Viun1g03521 274 FunFam Werner Syndrome-like exonuclease 74 274 - -
Viun1g03521 274 PANTHER 3-5 EXONUCLEASE 87 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03521 Viun-Chr1 41857862 41860607 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03521 K22807 - gmx:100801291 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03521 1 41857862 41860607 Viun1g03521 1 41857862 41860607 ECH