Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03520 ATGAGCACCGTTGATAAAATGCTGATCAAGGGCATCCGGAGTTTCGACCCGGAGAACAAGAACGTCATCACCTTCTTCAAACCCTTAACCCTAATCGTTGGTCCCAACGGTGCCGGCAAGACCACCATCATCGAGTGTTTGAAGCTTTCTTGCACCGGCGAGTTGCCTCCTAACGCCAGGTCTGGCCACAGTTTCATCCACGACCCCAAGATACACCAAGGCATTGGAAGTTATAAAGAAACTTCACAAGGAGCAGGCTCAAGAGATAAAGACTTACAAGCTCAAACTGGAACATCTTCAAACTCTCAAAGATGCTGCCTATAA 324 0.4784 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKIHQGIGSYKETSQGAGSRDKDLQAQTGTSSNSQRCCL 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03520 107 MobiDBLite consensus disorder prediction 75 107 - -
Viun1g03520 107 MobiDBLite consensus disorder prediction 76 107 - -
Viun1g03520 107 Pfam AAA domain 7 82 IPR038729 GO:0006302|GO:0016887
Viun1g03520 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 77 IPR027417 -
Viun1g03520 107 Gene3D - 4 101 IPR027417 -
Viun1g03520 107 PANTHER RAD50 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03520 Viun-Chr1 41843427 41854056 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03520 K10866 - vun:114182190 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03520 1 41843427 41854056 Viun1g03520 1 41843427 41854056 ECH