Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03507 ATGTCGCCACCGATTCCTATAAGCTCCACCTATGCTTCCACCTTCTCTTATTCTGCTTATGTCTTTCCTTCCGTCTATGCTCGCACCAACTTCACCAGGATCAATCTTCATCTACCTATCTTATGCCAATTTGAATCTAAGACAGAGAAACCGCTGACAAGAAGGTGCGCCCCCTTTCTTGAAAGTTCATTGCTATCTGGTAATGGTGTTGTGGCCTCAGAAGAATGGAAAACTGTTCCTGATATTTGGAGATCTTCTGCCGAGAAGTATGGTGACAAAATAGCATTAGTAGATCCGTATCATGATCCTCCTTCAACTATGACATATAAACAGTTGGAGGATGCAATATTGGACTTTGCTGAAGGGTTGAGAGTTATTGGAGTAAGACCCTATGAAAAGCTTGCACTTTTTGCTGATAATTCTTGTCGCTGGCTTGTAGCAGATCAAGGTATGATGGCATGTGGGGCAATCAATGTGGTAAGGGGTTCGAGGTCATCAACTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGTGTTGCACTAGCTGTCGACAATCCTGAAATGTTTAATCGAATAGCAAAACTATTTTGTTCGAAGAATTCAATGAAATTTATTATTCTGCTTTGGGGAGAAAAATCAGGCCTAGTCAGTGAAGGAGAAAAGGAGGTGCCTGTCTATACTTTCATGGAAGTCATACATTTGGGACAAGAGAGTCGCAGAGTATTGTTTGATTCCCTTGATAATAGGAAGCACTACTTGTATGAAGCAATCAAATCTGATGATATTGCTACTCTTGTATACACGAGTGGAACTACTGGAAATCCAAAAGGTGTTATGCTAACGCATCAGAATCTTTTGCATCAGATAAAAAATTTAGGGGATATTGTACCGGCTGAAGTTGGGGATAGATTTCTTAGCATGTTGCCTTCCTGGCATGCATATGAAAGAGCTTCTGAATATTTCATCTTCTCGTGCGGTGTTGAACAAGTATACACAACTGTGAGAAAGTTGAAGGATGATTTGAGACGTTATCAGCCACATTACTTGATTTCTGTCCCTTTAGTTTATGAAACTTTATACAGTGGGATACAGAAGCAGATATCTACAAGCTCCCTTGTTAGAAAACTTGTTGCACTAACATTTTTAAGGGCTAGCTTGAGGTACATGGAATGCAGACGTATTTATGAGGGTAAATGTCTAACGAAGGATCAGAAGACACCTTCTTATCTCCTATCAACGTTGGATTGGTTATGGGCTAGAATTATTGCCACAATATTGCTTCCAGTTCATTTGTTGGCGAAGAAATTGGTCTACAGTAAAATTCATTCAGCTATTGGAATTTCAAAGGCTGGAATAAGCGGTGGTGGTAGCCTATCTTCTCACGTGGATAGATTTTTTGAGGCTATTGGCGTGACTGTGCAGAATGGATATGGTTTAACAGAAACTTCACCAGTTGTTGCTGCTCGACGACTTAGTTGTAATATTATTGGGTCTGTTGGTCATCCAATTAAGCATACGGAATTCAAAATCGTAGATTCTGAGACTGATGAAGTTCTCCCACCTGGTTCAAAGGGAATTTTGAAAGTTAGAGGTCCACAATTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGTCTTAGATAGGGATGGCTGGCTGAATACTGGGGATATTGGTTGGATTGTTCCACATCATTCAACTGGGCGGAGTCGTAATTCCAATGGAGTAATTGTTGTTGATGGTCGTGCTAAAGACACCATTGTGCTTTCTACAGGTGAAAATGTTGAACCGGGAGAGATTGAAGAAGCTGCCATGAGGAGTAGCCTCATACATCAAATTGTTGTTATTGGACAGGATAAGCGACGTTTAGGGGCTGTCATTGTTCCTAACAATGAAGAAGTCCTAAAGGCAGCAAGGGAGTCGTCAATTATAGATCCTAACAGTTCTGATGTCAGTCAGGAAAACGTGACCAGCCTAATATATAAAGAATTATGGACATGGACATCAGAGTCTCCATTTCAAATTGGACCAGTCCTTGTCGTAAACGACCCCTTCACGATTGATAATGGCCTTATGACACCCACCATGAAAATTCGAAGAGATAAAGTTGTGGCTAAATATAGGGACCAAATAGAGAATCTATACAAGTAA 2160 0.4056 MSPPIPISSTYASTFSYSAYVFPSVYARTNFTRINLHLPILCQFESKTEKPLTRRCAPFLESSLLSGNGVVASEEWKTVPDIWRSSAEKYGDKIALVDPYHDPPSTMTYKQLEDAILDFAEGLRVIGVRPYEKLALFADNSCRWLVADQGMMACGAINVVRGSRSSTEELLQIYNHSESVALAVDNPEMFNRIAKLFCSKNSMKFIILLWGEKSGLVSEGEKEVPVYTFMEVIHLGQESRRVLFDSLDNRKHYLYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLGDIVPAEVGDRFLSMLPSWHAYERASEYFIFSCGVEQVYTTVRKLKDDLRRYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTFLRASLRYMECRRIYEGKCLTKDQKTPSYLLSTLDWLWARIIATILLPVHLLAKKLVYSKIHSAIGISKAGISGGGSLSSHVDRFFEAIGVTVQNGYGLTETSPVVAARRLSCNIIGSVGHPIKHTEFKIVDSETDEVLPPGSKGILKVRGPQLMKGYYKNPSATNQVLDRDGWLNTGDIGWIVPHHSTGRSRNSNGVIVVDGRAKDTIVLSTGENVEPGEIEEAAMRSSLIHQIVVIGQDKRRLGAVIVPNNEEVLKAARESSIIDPNSSDVSQENVTSLIYKELWTWTSESPFQIGPVLVVNDPFTIDNGLMTPTMKIRRDKVVAKYRDQIENLYK 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03507 719 ProSitePatterns Putative AMP-binding domain signature. 266 277 IPR020845 -
Viun1g03507 719 Gene3D - 450 493 - -
Viun1g03507 719 SUPERFAMILY Acetyl-CoA synthetase-like 74 718 - -
Viun1g03507 719 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 42 719 - -
Viun1g03507 719 Gene3D - 73 402 IPR042099 -
Viun1g03507 719 Gene3D Luciferase; Domain 3 494 564 - -
Viun1g03507 719 Pfam AMP-binding enzyme 85 592 IPR000873 -
Viun1g03507 719 Gene3D - 587 716 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03507 Viun-Chr1 41759829 41770763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03507 45 719 Acyl Lipid Metabolism Gene Families AT3G23790 70.414 0.0 1006
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03507 K01897 - gmx:100782583 1279.23