Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03505 ATGGCATTGCCAATGGTGTCACTTGCTTCTGTCATATTTCAATCCTTCAACTTCAACTTCAACTGTACTTCCCTTTCATTCCCACACACTTCACATTTTGTTCGCCGCTTTCCATGTCACTGCTCACATTCCCTTCGTTTACCATGTGGGAGAGAGTCACCAAGCGCCAGGATATGTGCTTCAGTTACAGATGTTTCCGTGGATGTAGCGGTAGAGGAAAAACGGCTCCCGAAAGGAGAAACTTGGTCTGTTCACAAGTTTGGTGGAACCTGTGTGGGAAACTCATCGAGAATAAAGAATGTTGCGGACATAATTATTAATGATGATTCTGAGAGGAAATTCGTTGTGGTCTCTGCTATGTCAAAAGTGACAGATATGATGTATGGTCTTATCGACAAGGCTCAATCCCGTGACGAGTCTTATGTTTCTGCCCTCGATGTTGTTTTAGAGAAGCACAGCACAACTGCACATGACCTAATTGCTGGAGAAGATCTTGCTGCTTTTTTATCGCAGTTGCGTCAAGACATCACTGACCTAAAAGCAATGCTTCAGGCCATATACATTGCTGGTCATGCCACAGAATCATTTACTGAATTTGTTGTGGGACACGGAGAGTTATGGTCTGCACAGCTATTGTCTTTAGTAATTAAGAAACAAGGGATTGACTGCAAATGGATGGATGCGAGGGAAGTTCTTATTGTAAAACCTACTCGTTCTGATCATGTTGATCCGGATTACATGGAATCTGAACGAAGACTTGAGAAGTGGTACTCTCTAAATCCTTCTGATGTGATCGTTGCCACGGGATTTATTGCAAGCACACCTCAGAATATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTTTCGGCAGCTATTATGGGTGCCCTCTTTAAGGCTCGCCAGGTCACAATTTGGACAGATGTAGACGGCGTGTATAGTGCAGATCCCAGAAAAGTTGGCGAAGCTGTGATTTTGAAGACATTGTCTTATCAAGAAGCATGGGAAATGTCTTATTTTGGTGCCAATGTCTTACATCCACGCACAATAACCCCAGTTATTCGATATGGCATACCCATCATCATAAGGAATATTTTCAACCTTTCTTCTACTGGAACAATGATCTGCCATCCTTCTATTATTGGTGATGAAGATAGGCTGATATTAAAAAATTATGTCAAAGGCTTTGCAACCATAGACAACGTGGCACTCGTAAACGTCGAGGGAACCGGAATGGCTGGTGTTCCAGGAACTGCTAGCGCTATTTTTTCTGCAGTAAAAGAGGTTGGAGCGAATGTTATTATGATTTCACAGGCTAGTAGTGAGCATTCTGTGTGCTTTGCTGTTCCTGAGAAAGAAGTAAAAGCTGTTGCTGAGGTTTTGCAGTCTTTATTTCATGGAGCTTTGAATGTTGGTCGTCTTTCTCAGGTTGCCATCCTTCCAAATTGTAGTATTTTGGCAGCTGTAGGCCAGAAAATGGCAAGTACTCCTGGAGTTAGTGCCACCCTTTTCGAAGCATTGGCAAAGGCCAACATAAATGTACGTGCTATAGCACAAGGTTGTTCTGAGTATAACATCACCGTAGTTGTAAAGCGGGAGGATTCTGTAAAGGCTTTACGGGCCGTTCATTCCAGATTTTATCTGTCGAGAACCACCATAGCAATGGGCATTATTGGGCCTGGATTAATTGGAAGCACACTGCTTGACCAGCTAAGCGACCAGGCTGCAGTTCTTAAAGAGGAACTTAACATTGATTTGCGTGTGATGGGGATCATGGGTTCTAAGTTGATGCTCCTTGATGATGATAATGGCATCAACTTAGACAAATGGAGAGAACTTCGAGAAGAAAAAGGGGAAGTGGCTAATTTGGAAAAGTTTGTACAAAATGTGCATGGAAATCATTTTATACCAAACACTGTGTTAGTGGACTGCACAGCTGACTCCGCCATTGCTAGCAATTACGAAGATTGGCTGTGCAAAGGAATGCATGTCATCACTCCCAACAAGAAGGCAAATTCAGGACCACTTGATGAGTATTTGAGGTTAAGAGCTCTTCAGAGACAATCATACACACATTACTTCTATGAAGCTACTGTTGGGGCTGGTCTTCCAATTATCAGCACTTTACGGGGCCTTCTCGAGACAGGTGACAGAATATTGCAAATTGAAGGTATCTTCAGTGGGACTTTGAGTTACATCTTTAACAACTTCAAAGATGGCCGGCTTTTTAGTGAGGTAGTAGCTGAAGCAAGGGATGCAGGCTATACTGAGCCTGATCCAAGGGATGACCTCTCAGGAACTGATGTTGCCAGAAAGGTTATAATTCTTGCAAGGGAATCAGGTTTGAAGCTAGAGCTTTCTGATATTCCCGTTGAAAATCTCGTGCCAGAACCATTGAGAGGTAGTGCATCAGCTCAAGAGTTCATGCAGCAGTTGCCAAAGTTTGATCAGGAATTAGCAGAGAAATTAAAAGATGCAGAGAGTGCTGGAGAAGTGTTGAGATACGTGGGAGTGGTGGACGTGAGAAATAGGAAAGGAGTAGTAGAACTGAGAAGATACAAGAAGGATGATCCATTTGCACAAGTATCAGGATCAGATAACATGATTGCATTCACAACAAGAAGGTACAAAAGCCAGCCACTCATTGTTCGTGGACCTGGAGCTGGTGCCCAAGTCACTGCTGCCGGAATATTCAGTGACATCTTAAGACTTGCCTCATATCTTGGTGCTCCATCATAG 2739 0.4319 MALPMVSLASVIFQSFNFNFNCTSLSFPHTSHFVRRFPCHCSHSLRLPCGRESPSARICASVTDVSVDVAVEEKRLPKGETWSVHKFGGTCVGNSSRIKNVADIIINDDSERKFVVVSAMSKVTDMMYGLIDKAQSRDESYVSALDVVLEKHSTTAHDLIAGEDLAAFLSQLRQDITDLKAMLQAIYIAGHATESFTEFVVGHGELWSAQLLSLVIKKQGIDCKWMDAREVLIVKPTRSDHVDPDYMESERRLEKWYSLNPSDVIVATGFIASTPQNIPTTLKRDGSDFSAAIMGALFKARQVTIWTDVDGVYSADPRKVGEAVILKTLSYQEAWEMSYFGANVLHPRTITPVIRYGIPIIIRNIFNLSSTGTMICHPSIIGDEDRLILKNYVKGFATIDNVALVNVEGTGMAGVPGTASAIFSAVKEVGANVIMISQASSEHSVCFAVPEKEVKAVAEVLQSLFHGALNVGRLSQVAILPNCSILAAVGQKMASTPGVSATLFEALAKANINVRAIAQGCSEYNITVVVKREDSVKALRAVHSRFYLSRTTIAMGIIGPGLIGSTLLDQLSDQAAVLKEELNIDLRVMGIMGSKLMLLDDDNGINLDKWRELREEKGEVANLEKFVQNVHGNHFIPNTVLVDCTADSAIASNYEDWLCKGMHVITPNKKANSGPLDEYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEARDAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVENLVPEPLRGSASAQEFMQQLPKFDQELAEKLKDAESAGEVLRYVGVVDVRNRKGVVELRRYKKDDPFAQVSGSDNMIAFTTRRYKSQPLIVRGPGAGAQVTAAGIFSDILRLASYLGAPS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03505 912 ProSiteProfiles ACT domain profile. 407 476 IPR002912 -
Viun1g03505 912 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 81 378 - -
Viun1g03505 912 Pfam Homoserine dehydrogenase 704 902 IPR001342 GO:0006520
Viun1g03505 912 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 715 886 - -
Viun1g03505 912 Gene3D - 554 904 - -
Viun1g03505 912 CDD ACT_AKi-HSDH-ThrA_2 483 548 - -
Viun1g03505 912 ProSitePatterns Homoserine dehydrogenase signature. 750 772 IPR019811 GO:0006520
Viun1g03505 912 Pfam Amino acid kinase family 83 364 IPR001048 -
Viun1g03505 912 Gene3D Dihydrodipicolinate Reductase; domain 2 715 886 - -
Viun1g03505 912 NCBIfam aspartate kinase 82 546 IPR001341 GO:0004072|GO:0008652
Viun1g03505 912 Gene3D - 82 378 IPR036393 -
Viun1g03505 912 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 551 726 IPR036291 -
Viun1g03505 912 Gene3D - 389 548 - -
Viun1g03505 912 SUPERFAMILY ACT-like 391 466 IPR045865 -
Viun1g03505 912 ProSitePatterns Aspartokinase signature. 84 92 IPR018042 GO:0004072|GO:0008652
Viun1g03505 912 PANTHER - 65 912 IPR011147 GO:0004072|GO:0004412|GO:0009067
Viun1g03505 912 Pfam ACT domain 411 465 IPR002912 -
Viun1g03505 912 Pfam Homoserine dehydrogenase, NAD binding domain 559 696 IPR005106 GO:0016491|GO:0050661
Viun1g03505 912 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 554 731 - -
Viun1g03505 912 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 704 889 - -
Viun1g03505 912 SUPERFAMILY ACT-like 474 562 IPR045865 -
Viun1g03505 912 ProSiteProfiles ACT domain profile. 488 565 IPR002912 -
Viun1g03505 912 Pfam ACT domain 481 544 IPR027795 -
Viun1g03505 912 CDD ACT_AKi-HSDH-ThrA-like_1 402 479 - -
Viun1g03505 912 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 390 548 - -
Viun1g03505 912 CDD AAK_AK-HSDH 82 376 IPR041743 -
Viun1g03505 912 SUPERFAMILY Carbamate kinase-like 83 377 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03505 Viun-Chr1 41746337 41752509 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03505 K12524 - gmx:100812202 1427.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03505 1 41746337 41752509 Viun1g03505 1 41746337 41752509 ECH