Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03490 ATGGCTGCTTCTGGATATATATCTGCTGCCAACTTGAATTGCCAGCTTGGCGCCAGACACATATCCAATCCCAAGCTGGGTTATGCAGATGCCAGAATTGCGTTGTCGTTTGGTGGTAGCGACTCTATGGGCGTTAGTGTGCGACCCGCTTCAGTTCGTGCTTCTAAGAGGAACCATTTCTCTCCTTTGCGTGTCGTTTGCGCCGATTATCCACGACCGGAGCTTGAAAACACCGTTAATTTCATCGAAGCTGCTTACTTGTCTTCCACCTTTCGTACTTCTCCGCGTCCACTACAACCGTTGAAGGTCGTTATTGCCGGTGCAGGATTGGCTGGTTTATCGACTGCAAAATATTTGGCTGATGCTGGGCATAAGCCTATATTGCTGGAAGCTAGAGACGTTCTAGGTGGAAAGGTTGCTGCATGGAAAGATGAGGATGGAGACTGGTATGAAACAGGTCTACACATCTTCTTTGGGGCTTACCCTAATGTGCAGAACTTATTTGGAGAACTTGGCATTAATGATCGGTTACAATGGAAGGAGCATTCCATGATTTTTGCTATGCCAAGTAAACCCGGGGAGTTTAGTCGATTTGATTTTCCCGAAATCCTTCCATCCCCGTTAAATGGAATCTGGGCTATATTGAGGAACAACGAGATGCTGACATGGCCAGAGAAAGTCAAATTTGCAATTGGGCTTCTGCCAGCTATGCTTGGTGGACAGGCATATGTTGAGGCTCAAGATGGTCTTTCTGTTAAAGAATGGATGATAAAACAGGGTGTTCCTGATCGAGTAACTGATGAGGTGTTCATAGCAATGTCGAAGGCACTAAACTTCATCAATCCCGATGAACTTTCAATGCAATGTATATTGATTGCTTTAAACCGATTCCTTCAGGAAAAACATGGTTCTAAGATGGCATTTTTGGATGGCAATCCCCCTGAAAGACTTTGTATGCCAGTAGTTGATCATATTCAGTCATTGGGTGGGGAAGTTCATCTCAGTTCACGCATTAAAAAAATTGAGCTAAATGATGATGGAACAGTGAAGAGCTTCTTACTAAGTAATGGGAAGGTGATCGAGGGGGATGCTTACGTGTTTGCAACTCCAGTGGATATTCTGAAGCTTCTTTTACCTGACAACTGGAAAGGGATTCCATATTTCCAGAGATTGGACAAATTAGTTGGAGTCCCCGTCATAAATGTTCACATATGGTTTGACAGAAAACTGAAGAACACATATGATCACCTTCTCTTTAGCAGAAGTCCCCTTCTGAGTGTATATGCTGACATGTCTGTAACTTGCAAGGAATATTATGACCCAAACCGGTCTATGTTAGAGTTGGTTTTTGCACCAGCTGAAGAATGGATTTCACGTAGTGATGAAGATATCATTGAAGCCACGATGTCTGAGCTTGCCAAACTCTTTCCTGATGAAATTTCTGCCGACCAAAGCAAAGCAAAGATTCTCAAGTACCATGTTGTTAAAACACCAAGGTCGGTTTACAAAACCGTTCCAAATTGTGAACCTTGCCGTCCGGTACAAAGATCTCCTATTGAAGGTTTCTACTTAGCTGGAGATTACACAAAACAAAAATATTTAGCTTCAATGGAAGGTGCTGTTCTTTCAGGGAAGCTGTGTGCACAAGCTATTGTACAGGATTGTGAAGTACTTGCTGGTCGAGGCCAGAAAAGAATGGCTGAAACGAGTGTTGTCTAA 1719 0.4334 MAASGYISAANLNCQLGARHISNPKLGYADARIALSFGGSDSMGVSVRPASVRASKRNHFSPLRVVCADYPRPELENTVNFIEAAYLSSTFRTSPRPLQPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGEFSRFDFPEILPSPLNGIWAILRNNEMLTWPEKVKFAIGLLPAMLGGQAYVEAQDGLSVKEWMIKQGVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIQSLGGEVHLSSRIKKIELNDDGTVKSFLLSNGKVIEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWISRSDEDIIEATMSELAKLFPDEISADQSKAKILKYHVVKTPRSVYKTVPNCEPCRPVQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDCEVLAGRGQKRMAETSVV 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03490 572 PANTHER PROTOPORPHYRINOGEN OXIDASE 91 558 - -
Viun1g03490 572 NCBIfam 15-cis-phytoene desaturase 102 552 IPR014102 GO:0016117|GO:0016166
Viun1g03490 572 SUPERFAMILY FAD/NAD(P)-binding domain 99 554 IPR036188 -
Viun1g03490 572 Pfam Flavin containing amine oxidoreductase 110 551 IPR002937 GO:0016491
Viun1g03490 572 Gene3D - 99 559 IPR036188 -
Viun1g03490 572 FunFam 15-cis-phytoene desaturase, chloroplastic/chromoplastic 98 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03490 Viun-Chr1 41646363 41652494 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03490 K02293 - gmx:547970 1065.45