Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03478 ATGAGTGATTGGGGTCCTGTGGTGATAGCAGTGGTGCTGTTTGTGTTGTTGAGTCCTGGTCTTCTGATTCAAATTCCTGGGAAGAGCAGAGTGGTGGAGTTTGGAAACATGCAAACCAGTGGAATTTCTATCTTGGTCCACACTATCATCTTCTTTGGTCTCATTACCATTTTTCTTATTGCCATTGGTGTGCATATCAACACTGGCTAA 210 0.4333 MSDWGPVVIAVVLFVLLSPGLLIQIPGKSRVVEFGNMQTSGISILVHTIIFFGLITIFLIAIGVHINTG 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03478 69 PANTHER OS05G0103400 PROTEIN 1 68 IPR021775 -
Viun1g03478 69 Pfam Protein of unknown function (DUF3339) 1 66 IPR021775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03478 Viun-Chr1 41588900 41589660 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03478 - - atr:18438037 119.012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03478 1 41588900 41589660 Viun1g03478 1 41588900 41589660 ECH
Viun1g03478 1 41588900 41589660 Viun3g02232 3 19070928 19071349 PCT