Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03465 ATGTACGGGTCCGAGAATAACCGCGATGATTCTGAGCGAACCGCTTTCAGAAGAGCAGAGAAGAAATACAAGCTCTACTACGACAACAATGCCTCTTCCAAGAACAAAAAGAAAAAACAACCTAAACCAGTGGATTTAACGGAGGTTCTTGACTTCAGAGCCATTCTAGAATGCTATCTTCGAAACGGTGCGCTTCCTCCCGGTGTTATCGTTCTTCACGACAACTTCACCTCTCCGGTTTTCTCTTTGCAAAATCGCCCAGGCTTTTATTTTATTCCTGGGGCATTAACCATAGAGAAACAATGTAGTTTGATAAAGGAAAGTTTGACTGATTTTCCGCAGCCCCCTAACAGAACAAATCACAATGCCATTTATGGTCCAATTCAGGATGTTTTTGGTGCTGCTAAGGAAGGGAAAGTTTTGGTCGAAGACAACTCACCAATTCCTTCATCAGAAACTGGTGCTGATATAGATAATGGAGATTGTAAGGAATGGAAATTTGCTACCCAAAAGGAAGCGTCGTTGCGAAAGTGCAAATCCGTTTCTGCTTCTGCGTTGCTTCGGAAGTTGCGATGGAGCACCCTGGGCCTGCAGTTTGATTGGTCCAAACGGAATTACGATATGTCTCTCCCACATAACAAAATCCCTGAACCACTGTGTGAACTTGCCAAACAATTGGCCAAGTCTGCTTTACCTGCTGGTGTTGAATTCAGACCTGAAGCTGCAATTGTGAATTACTTTGGTTTAGGGGACACGCTGGGTGGTCACCTTGATGACATGGAAGCAGATTGGAGCAAGCCTATAGTTAGTTTAAGTCTGGGTTGCAAGGCTATATTTCTTTTGGGAGGAAAATCCAGAGAGGATACTCCTCTGGCAATGTTCCTTCGAAGTGGCGATGTGGTTCTCATGGCTGGAGATGCAAGGGAATGCTTTCATGTTTCAAGATTTTTCCTAACTACTAGGAATTGGTTTCATCAATGTCGCAGGGGTTCCTCGAATCTTCACAGATGA 1011 0.4411 MYGSENNRDDSERTAFRRAEKKYKLYYDNNASSKNKKKKQPKPVDLTEVLDFRAILECYLRNGALPPGVIVLHDNFTSPVFSLQNRPGFYFIPGALTIEKQCSLIKESLTDFPQPPNRTNHNAIYGPIQDVFGAAKEGKVLVEDNSPIPSSETGADIDNGDCKEWKFATQKEASLRKCKSVSASALLRKLRWSTLGLQFDWSKRNYDMSLPHNKIPEPLCELAKQLAKSALPAGVEFRPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDTPLAMFLRSGDVVLMAGDARECFHVSRFFLTTRNWFHQCRRGSSNLHR 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03465 336 Pfam 2OG-Fe(II) oxygenase superfamily 177 313 IPR027450 -
Viun1g03465 336 SUPERFAMILY Clavaminate synthase-like 87 312 - -
Viun1g03465 336 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 6 312 IPR004574 -
Viun1g03465 336 Gene3D - 157 328 IPR037151 -
Viun1g03465 336 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 238 336 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03465 Viun-Chr1 41531490 41534206 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03465 K10765 - gmx:100811774 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03465 1 41531490 41534206 Viun1g03465 1 41531490 41534206 ECH