LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun1g03460	AATCTCGTTTGCAAGACGAGGAATCTGCTTCGAATTGCCATATTCAATATCAGTTATATCAGAGGACTATTTCCTGAGAAGTATTTCAATGATAAGTCTGTTCCTGCTTTAGAGATGAAGATAAAAAAACTAATGCCATTGGATGCCGAGTCTCGTAGACTAATTGATTGGATGGAGAAAGGGGTGTACGATGCCTTACAGAAGAAATATCTGAAGACGCTTCTGTTCTGTGTGTGCGAAGCAGTAGACGGACCAATGATTGAGGAATATGCATTTTCCTTCTGCTATTCCGACTCTGACAACCAAGAGGTTTCAATGAATATCAGCCGAACTGGAAACAAAAAAAGCCGGGGGGCCTTCAAGTGTAATTCGACTACAGAAATTACTCCCCAGCAGATGAGGAGTTCTGCGTGTAAAATGATCCGTACTCTGGTTCAGTTGATGAGAACTCTGGAGAAAATGCCAGAAGAGCGTACCATTCTGATGAAACTCCTATACTACGATGATGTGACGCCTGCTGATTATGAGCCTCCTTTCTTCCGGGGCTGCACAGGTGAAGAAGCTTATCATCCATGGGAGAAAAATCCTTTGAAAATGGAGGTTGGGAATGTAAACAGCAAGCACTTCGTATTAGCTCTGAAGGTGAAGAGTGTACTCGATCCTTGTGAGGATGATAACGAGGGAATCCCGGACGATGTGAGCAATGGCGATGATTCAATGCAACAGAATGAGTATTATGATACTGACAGTGAGGTTGATCTTACTCAAGGGAATCGATATGTAGTTGCTCCAATAGATAAACAGCAAGAACAGGAAGACAATAGCATGATTGATGAAGACAATACACAGGATCCGGTGGAAGATGAGCAACAGCGGGTCCGGATCAAGGAGTGGATCAACTGTTGTCACCGTGACACCATTGAACTTACTGATGTTCTATCGAATTTTCCCGACATCTCCGTGGTTCTAACTGAAGAGATCATGGATAAGTTTGTTGAGGAAGGTGTGCTGTTGAAGATAGGGAAGGAATCCTACGCCATTAACAAGGACAAGAACCTTCAATATGAGTTCACCATTGTGAAAGAAGAAATCGACGGCCAACTTCCTAAAGTCTTTGACAAAGCTTTGCAAGTTGAAGATCGCTTATACATGAAAGCTCTCTATCATGCTCTTCCGATGACGCACGTGTCAATCAGTAAGATTCAAAGTTTGCTTGAGGGAGAAGTAAACCAGACGGCAGCTCGAAAGATAATTGATAAAATGGTGCGGGATGGGTTTGTGGAACCCAAAGGCAGCAAAAGATTAGGGAAACGTGTAATCCATTCTGAGTTGACTGAAAGGAAATTCATTGAAGTCCAGAAAGCTCTAAGTACTACGGAAGATATGGATGTTGATCACTGTGAACCAAATAGCAAGTCCAAATTAACTGGTTTTCGTTTAAATGGAAACAACCATGACGTTTCTACATGTGGGGTTCTTCACTCCATTGGATCAGATCTAACCCGAATGAAAGTGACATCTGAGACAAACACTGACTCCGGGAATGGACAGAATACAACAAAGGCAAAAGAGCCCGGAAACACCCCCATAAGCAGGCCTGTTATTTCAAGAGAGAGTTTCGCGATAGGTAAAGAAAATGGAAGAACAAACGGAATTGCAAATCAAGGGGACGAAGGCGATACAATTATATGCAGTAAGTCTTCCCAAGAGAAACGGTCAAGGAAAACTAGCGCGGTGAAGGAGCCTATCCATCAAAATATAAAGCGACAGAGATCTGAGGTCTTGTGA	1788	0.4273	NLVCKTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLMPLDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFCYSDSDNQEVSMNISRTGNKKSRGAFKCNSTTEITPQQMRSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPADYEPPFFRGCTGEEAYHPWEKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEGIPDDVSNGDDSMQQNEYYDTDSEVDLTQGNRYVVAPIDKQQEQEDNSMIDEDNTQDPVEDEQQRVRIKEWINCCHRDTIELTDVLSNFPDISVVLTEEIMDKFVEEGVLLKIGKESYAINKDKNLQYEFTIVKEEIDGQLPKVFDKALQVEDRLYMKALYHALPMTHVSISKIQSLLEGEVNQTAARKIIDKMVRDGFVEPKGSKRLGKRVIHSELTERKFIEVQKALSTTEDMDVDHCEPNSKSKLTGFRLNGNNHDVSTCGVLHSIGSDLTRMKVTSETNTDSGNGQNTTKAKEPGNTPISRPVISRESFAIGKENGRTNGIANQGDEGDTIICSKSSQEKRSRKTSAVKEPIHQNIKRQRSEVL	595

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun1g03460	595	PANTHER	HORMA DOMAIN-CONTAINING PROTEIN 1	6	592	-	-
	Viun1g03460	595	MobiDBLite	consensus disorder prediction	506	526	-	-
	Viun1g03460	595	MobiDBLite	consensus disorder prediction	506	595	-	-
	Viun1g03460	595	Pfam	HORMA domain	7	208	IPR003511	-
	Viun1g03460	595	FunFam	Meiosis-specific protein ASY2	1	260	-	-
	Viun1g03460	595	Gene3D	HORMA domain	4	260	IPR036570	-
	Viun1g03460	595	MobiDBLite	consensus disorder prediction	221	243	-	-
	Viun1g03460	595	MobiDBLite	consensus disorder prediction	548	563	-	-
	Viun1g03460	595	MobiDBLite	consensus disorder prediction	564	595	-	-
	Viun1g03460	595	SUPERFAMILY	The spindle assembly checkpoint protein mad2	6	222	IPR036570	-
	Viun1g03460	595	ProSiteProfiles	HORMA domain profile.	1	215	IPR003511	-
	Viun1g03460	595	MobiDBLite	consensus disorder prediction	266	288	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun1g03460	K12778		-	gmx:100792473	1066.99

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun1g03460	1	41496093	41500759	Viun1g03460	1	41496093	41500759	ECH