Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03458 ATGCAAACTAAGAAAAAAACTTCTAGGCGAAATGCCAGAAATGCCAGTCAAGATCGCAGCAGTCCTAAGGTTTCTAGATCACAGAGGAAGGTTTCTGAAAATGGACGAGCTGCTGAAAAGAAAGTGACAGACCTAATTACATCATCTGTTAGAAAGAATAAATCTTATAACAATCTCGAGAATAAAGCTAGAGAACCTGTCCCCTCAACAGATTTGAATCATGAATACGAGTTTATGGACAGTGGGACTTCCAATCTTTGTTTGGAAAATGATACAGTTGATGGTGTTTCACTGGATTTTATGGGTTGTAACAATGAAGCTGCACATCTTGAGTCTGGAACTATATTTTCTCCTGGTTTTCACTTATCGAAAAATCCTGGAGGAAAAGTTGTTGATAGAGTTGATTTTATCAAAATTTTTCAGAATGAAGACCACAAGAGAATTTCTCCATGCCAAGAAATAAAGTCACCACAGGAAGATACAGTAAATGGTCCTGGCAGTGAAGACTTTGACACTGCAATGGAAATAGATATGAACAATTCATCCAACTTCTCTAATTCAGGGAGCTGTGGCAATCAGATGCATGCTTTAGGCACAGAAAAGGTGAACGGTTGCAATTCTGATTTTGATGGAAATGGTCTTTCCATGGAGGTTTCTGCCATATATCTTGCCATGAAAAACTCAAAGCTAGAATGTGTTGATGAGCATGGTCAGGATCCCATGTCTTCTGAAATATGTACAGAGGAGGATGAGTTCGAGGATTTTGATGATTTTGACCCATACTTATTCATAAAGACCTTACCGGACCTGTCAACAGTGGTTCCAACTTTTAGACGATTGTTGTTACCTAAGCAGACACGTAGTTGCCCTTCTACTACTCTTGTTCTGGATTTGGATGAAACTTTGGTGCATTCTACCCTGGAACCATGTGAGGATGTTGACTTCACTTTTCCTGTTAATTTCAATTGTGAGGAGCACATTGTCTATGTTCGCTGCCGCCCTCATCTCAAAGATTTCCTTGAGAGAGTTTCTGGTCTTTTTGAGATTATTATATTTACAGCCAGTCAAAGTATTTATGCTGAACAACTTCTAAACGTTCTTGATCCAAAGCGGAAGATATTTCGTCACCGTGTATACCGTGAGTCCTGTGTTTATGTCGAGGGGAATTATCTCAAAGATTTAACAGTTCTGGGTCGTGATTTGGCACACGTTATAATAATTGACAATTCCCCACAGGCATTTGGATTCCAGGTGGATAATGGAATACCGATTGAGAGTTGGTTTGAAGATCGTTCAGATCGAGAATTGCTTTCATTACTTCCGTTTTTGGAGAGCTTGGTTGGTGTTGATGATGTCCGGCCACTAATTGCAAAGAAATTCAACCTGCGAGGGAAAATTGCTGCAGCCGTGCATCCTCTAAACACAAATAGAAGAGATTTCTTATCAGAATGA 1452 0.396 MQTKKKTSRRNARNASQDRSSPKVSRSQRKVSENGRAAEKKVTDLITSSVRKNKSYNNLENKAREPVPSTDLNHEYEFMDSGTSNLCLENDTVDGVSLDFMGCNNEAAHLESGTIFSPGFHLSKNPGGKVVDRVDFIKIFQNEDHKRISPCQEIKSPQEDTVNGPGSEDFDTAMEIDMNNSSNFSNSGSCGNQMHALGTEKVNGCNSDFDGNGLSMEVSAIYLAMKNSKLECVDEHGQDPMSSEICTEEDEFEDFDDFDPYLFIKTLPDLSTVVPTFRRLLLPKQTRSCPSTTLVLDLDETLVHSTLEPCEDVDFTFPVNFNCEEHIVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFEDRSDRELLSLLPFLESLVGVDDVRPLIAKKFNLRGKIAAAVHPLNTNRRDFLSE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03458 483 FunFam CTD small phosphatase-like protein 2 280 460 - -
Viun1g03458 483 MobiDBLite consensus disorder prediction 1 49 - -
Viun1g03458 483 SUPERFAMILY HAD-like 281 457 IPR036412 -
Viun1g03458 483 Gene3D - 277 461 IPR023214 -
Viun1g03458 483 PANTHER DULLARD PROTEIN PHOSPHATASE 49 459 - -
Viun1g03458 483 SMART forpap2 290 434 IPR004274 -
Viun1g03458 483 NCBIfam dullard-like phosphatase domain 292 455 IPR011948 GO:0016791
Viun1g03458 483 CDD HAD_FCP1-like 293 424 - -
Viun1g03458 483 ProSiteProfiles FCP1 homology domain profile. 287 446 IPR004274 -
Viun1g03458 483 Pfam NLI interacting factor-like phosphatase 293 453 IPR004274 -
Viun1g03458 483 MobiDBLite consensus disorder prediction 23 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03458 Viun-Chr1 41490067 41494430 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03458 K17616 - gmx:100804307 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03458 1 41490067 41494430 Viun1g03458 1 41490067 41494430 ECH