Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03444 ATGCCACAGACAGAAAAATCGCTCGGTAACAACCTCCCAATAATTCGCATTCCAGGAGATGGTAGATGTTTGTTTAGGGCTGTGGTGTATGGTGCATGCCTCAGATCAGGTGAACCATCTCCAAGTCTTAGTAGACAAAAAGAACTTGCAGATGAACTTAGAGCCAAAGTTGTTGATGAATTCATCAAGAGGAGGGCAGACACAGAGTGGTTTCTAGAAGGTGACTTTGAGACCTATACGGTACAGATGAGAAAACCTCACATATGGGGAGGAGAACCTGAACTTCTCATGTCCTCACATGTTTTACAGATGCCAATAACAGTGGTGATGCAGGATAAGAATTCGAGTAACCTTAAAGTTATAGCTGAATACGGTGAGGAATATGGGAAGGAGAACCCTATTGGAGTTATTTATCATGGTTATGGCCACTACGATGCATTATTGAAGTGTTCCTCTACTTATGTGCAGTCTTAG 474 0.4241 MPQTEKSLGNNLPIIRIPGDGRCLFRAVVYGACLRSGEPSPSLSRQKELADELRAKVVDEFIKRRADTEWFLEGDFETYTVQMRKPHIWGGEPELLMSSHVLQMPITVVMQDKNSSNLKVIAEYGEEYGKENPIGVIYHGYGHYDALLKCSSTYVQS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03444 157 SUPERFAMILY Cysteine proteinases 11 149 IPR038765 -
Viun1g03444 157 Pfam OTU-like cysteine protease 18 144 IPR003323 -
Viun1g03444 157 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
Viun1g03444 157 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 16 150 - -
Viun1g03444 157 FunFam OTU domain-containing protein 2 153 - -
Viun1g03444 157 Gene3D - 2 156 - -
Viun1g03444 157 CDD OTU_plant_OTU4-like 11 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03444 Viun-Chr1 41416747 41418588 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03444 K18342 - gmx:100792132 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03444 1 41416747 41418588 Viun1g03444 1 41416747 41418588 ECH