Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun1g03438 | ATGGGGTTTCTAAGGCTTATAAGACGGTATGCTTACCCCTTTAGGGACAAAACTCGAATTAGACTTTACGCACTTCAGCATATGCAAAGGAGAGGATTCTCAAAGGAGGGAGTTCCTAATGGCAATGATGTGGTGCATCCAGTTCTGATCATTGGCGCTGGACCTGTGGGTCTTGTTCTCTCTATTCTTCTCACAAAATTAGGTGTTAATTGCACAGTTTTGGAGAGAAACAAGGCATTTTCTAAACATCCTCAAGCACACTTTATCAACAATCGATCCATGGAGATATTCCGCAAAATTGATGGCCTTGTTGAAGAGATTCAAAGGTCTCAACCACCAGTAGATTTATGGAGGAAATTTATATATTGTACTTCCCTCTCTGGTTCAATTCTTGGATCTGTAGATCACATTCAACCTCAAGATCTTGAGCATGTTGTCAGCCCAGTCTCCGTTTCACACTTCTCACAGTACAAGCTAACTATGTTACTATTCAAGCAACTTCAAAATCTAGGCTTTCAAATATGTACACCTGAAAGCTTGGAAGGGAATGAACAGTCTTGTGAACAGAAAATAATGATGGGCCACGAGTGTGTATCCATTGATGCCAGTGATGATTTTATAACAGTAACTGCGTCTTCTGTCATTAAGGGGAAGCGTGTAGAACAGAATATTCACTGTAACATCCTTATTGGCACAGATGGTGCAGGTAGTACTGTAAGAAAGCTTGTAGGAATAGAAATGAGAGGTGAGAAGGACTTGCAAAAACTTGTCAGTGTCCATTTCTTTAGCAGAGACCTTGGCCAGTTTTTGCTTGAGGAAAATCCTGGTATGCTTTTTTTTATCTTCAACACTGAAGCTATCGGGGTCCTTGTTGCGCATGATCTCAGGCAAGGGGAATTTGTATTGCAGATACCCTTTTATCCACCTCAGCAAACAATTGAGGATTTCAGTCCAAAGGCATGTGAGAAATTGATCAGCAAACTTGTTGGTCGAGAGTTTGGAGATGTAGATGTAATAGATATAAAACCATGGATCATGCATGCTGAAGTTGCTGAGAGGTTTATATGTAGAGGCAACCGTATATTACTTGCCGGTGATGCCGCTCATCGTTTTCCTCCTGCTGGTGGATTTGGAATGAATACAGGCATTCAGGATGCTCATAATCTTGCCTGGAAAATTGCTTCTGTGATTAAGGGTATTGCCCCAACTTCAATGTTAAATACCTATGAAATCGAACGTAAACCGATTGCTTTATTCAATACAAGATTAAGTCTAGAAAACTATAAAGCTGCCATGTCTGTTCCTGCTGCACTTGGTCTTGATCCAACTATTGCAAATACAGTACATCAATTTATTGTTAATGGGATTGGTTCCATCTTACCATCCGGACTTCAGAAGGTAGCTTTGGATGGAATTTTTGGAATCGGTCGTGCACAGGTCTCAGAATTTGTCCTAAATGAAAGTAACCCTCTTGGATCCTCAAGGTTGGCTAAGCTAAAACATATATTTGAAGAAGGAAAAAGCCTTCAACTTCAGTTCCCTGCTGAAGATCTTGGTTTTAGGTACCTACAAGGAGCACTTGTGCCTGAGAGTAATGACATTGAGGGTCCCCCAGAAGTACTAACAGGGCGTCGGAGGGACTACACCCCTTCAGCCCAGCCAGGATCAAGATTGCCTCATATGTTTGTGAAAGTAAACCCGTTATGTGAGGAGACTATTTCTACACTGGATCTTGTGTCAGGGGATAAAGTTGAATTCGTTCTCATCATCGCACCTGTGGAGGAATCTTATCATCTAGCTCGTGAAGCATTCAAGGTGGCTGAGGAACAAGAAATTTCTCTGAAAGTGTGTATTTTTTGGTCTACCGATTCTGTTGAAGGACTTGAGAAAGGAAGTGAAACATCATTATCACCTTGGAAGAATTATGCAGATGTTATTGAAGCTCAGTCATCCACTTCAAATTGGTGGGATATGTGTAACATGACGAGCAGAGGGGCGATTTTAGTTAGACCTGATGAACATATTGCCTGGCGTACAAGTTCAGGACTTGCTGAGGATCCTAGAGTGGAAATGCAGAGGGTTTTTGCTGCAATACTGGGAGAACACAGTTAA | 2112 | 0.4152 | MGFLRLIRRYAYPFRDKTRIRLYALQHMQRRGFSKEGVPNGNDVVHPVLIIGAGPVGLVLSILLTKLGVNCTVLERNKAFSKHPQAHFINNRSMEIFRKIDGLVEEIQRSQPPVDLWRKFIYCTSLSGSILGSVDHIQPQDLEHVVSPVSVSHFSQYKLTMLLFKQLQNLGFQICTPESLEGNEQSCEQKIMMGHECVSIDASDDFITVTASSVIKGKRVEQNIHCNILIGTDGAGSTVRKLVGIEMRGEKDLQKLVSVHFFSRDLGQFLLEENPGMLFFIFNTEAIGVLVAHDLRQGEFVLQIPFYPPQQTIEDFSPKACEKLISKLVGREFGDVDVIDIKPWIMHAEVAERFICRGNRILLAGDAAHRFPPAGGFGMNTGIQDAHNLAWKIASVIKGIAPTSMLNTYEIERKPIALFNTRLSLENYKAAMSVPAALGLDPTIANTVHQFIVNGIGSILPSGLQKVALDGIFGIGRAQVSEFVLNESNPLGSSRLAKLKHIFEEGKSLQLQFPAEDLGFRYLQGALVPESNDIEGPPEVLTGRRRDYTPSAQPGSRLPHMFVKVNPLCEETISTLDLVSGDKVEFVLIIAPVEESYHLAREAFKVAEEQEISLKVCIFWSTDSVEGLEKGSETSLSPWKNYADVIEAQSSTSNWWDMCNMTSRGAILVRPDEHIAWRTSSGLAEDPRVEMQRVFAAILGEHS | 703 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun1g03438 | 703 | Pfam | FAD binding domain | 47 | 417 | IPR002938 | GO:0071949 | |
| Viun1g03438 | 703 | Gene3D | - | 114 | 353 | - | - | |
| Viun1g03438 | 703 | PANTHER | TRK SYSTEM POTASSIUM UPTAKE PROTEIN | 45 | 696 | - | - | |
| Viun1g03438 | 703 | Gene3D | - | 515 | 701 | - | - | |
| Viun1g03438 | 703 | Gene3D | - | 47 | 417 | IPR036188 | - | |
| Viun1g03438 | 703 | SUPERFAMILY | FAD/NAD(P)-binding domain | 47 | 438 | IPR036188 | - | |
| Viun1g03438 | 703 | PRINTS | Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature | 391 | 409 | - | - | |
| Viun1g03438 | 703 | PRINTS | Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature | 225 | 240 | - | - | |
| Viun1g03438 | 703 | PRINTS | Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature | 358 | 373 | - | - | |
| Viun1g03438 | 703 | PRINTS | Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature | 409 | 425 | - | - | |
| Viun1g03438 | 703 | PRINTS | Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature | 47 | 69 | - | - | |
| Viun1g03438 | 703 | PRINTS | Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature | 373 | 389 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun1g03438 | Viun-Chr1 | 41389780 | 41396487 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun1g03438 | - | - | gmx:100794253 | 1315.44 |