Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03433 ATGTGGGGACTTCTTCGAACTCGAACGTGTTTGCGATATTCAGAGACTCTTCTTCATCAACCATGGAAGAAGAACGTAGGGTTTTGTTCTTTGTCCGCCGTTGACGGCCGTAACTGCCTTCTGGATCTGCCGGATATCGAGAAGGTTCTGACGGATATCAAAGCTGACGACGTTAAGGTGATACCAGTTCCCAAGCACTGCGATTGGGCTGATTTCATGGTTCTCGCCACTGGCAGGTCCACCTGGCACGTCAAGAACATCGCCCAAGCCCTAATTTACAAGGCTAAACAGAAACAGAGAGGAGCTGAACGAATGATGCTACCGAGTGTAGAAGGGGAAGCTGGAGGAAAGTGGATTGTCATTGATTCTGGTAAAGTGATAGTTCATGCACTTGATGAAAAGGCCAGAGCTTACTACAACTTGGAGGGTCTTTGGACCCGAGGGACAATTCAAAATGAACCTGATGGGGATTTAAAAAAAGCTTTAGTGAAGGTTCGGCGGAAAAACAATTCGAAGAAACCTGCACAAAAGAGTGCTTAA 540 0.4667 MWGLLRTRTCLRYSETLLHQPWKKNVGFCSLSAVDGRNCLLDLPDIEKVLTDIKADDVKVIPVPKHCDWADFMVLATGRSTWHVKNIAQALIYKAKQKQRGAERMMLPSVEGEAGGKWIVIDSGKVIVHALDEKARAYYNLEGLWTRGTIQNEPDGDLKKALVKVRRKNNSKKPAQKSA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03433 179 Hamap Ribosomal silencing factor RsfS [rsfS]. 33 146 IPR004394 -
Viun1g03433 179 SUPERFAMILY Nucleotidyltransferase 46 151 IPR043519 -
Viun1g03433 179 Gene3D Beta Polymerase, domain 2 42 156 IPR043519 -
Viun1g03433 179 PANTHER IOJAP SUPERFAMILY ORTHOLOG 35 155 IPR004394 -
Viun1g03433 179 Pfam Ribosomal silencing factor during starvation 46 145 - -
Viun1g03433 179 FunFam Mitochondrial assembly of ribosomal large subunit 1 41 157 - -
Viun1g03433 179 NCBIfam ribosome silencing factor 46 145 IPR004394 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03433 - - var:108320297 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03433 1 41360579 41363418 Viun1g03433 1 41360579 41363418 ECH