Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03418 ATGGCACACGCTTTGTCTTCTAATCTGACTCTTAACGTTCCCACATCGAGGTATCTTCTTCACTCCAGACCAACCCAGTTGAAGCCAGTGAAGTTCATGGTGATGGGGGACGCAAGAGAAAAGCTTGACCACATCCCAAAACCCAACAAGAACCACCACCACCATCCTCTTCCCAAAAAGAAAGTTTCCCCTACTGCACCCATAGGGTTGTGGGACAGGTTTCCGACGGCGAGGACAATGCAAGAGATGATGGAGACGATGGAGAGGATGGTGGAGGACCCTTTTGCATTCAGCACACTTGAGTGGCCATCGTCACCGTTACCGAGTGAGGGTGTGGGAGGGTACAGAAGAAGAGGAAGGGCACCATGGGAAGTGAAAGAGGGAGAGAGTGAGTACAAGATGAGGTTGGACATGCCCGGGATGAAGAAAGAGGATGTGAAAGTGTGGGTGGAGGAAAAGATGCTTGTGGTTAAAGCAGAAAAGGAAGCGAAGAAGAAAGAGATGGTGGAAGAACAGGAAGAGGAAGAAGAAGAGGGATGGTCTGCAAAGAGTTATGGGAGGTATAGCAGTAGGATTGCTCTGCCGGAGAATGTGCAGTTTGAGAATATCAAGGCTGAGGTTAAGGATGGTGTTCTCTACATCGCCATTCCCAAAGCTACCACTTATTCCAACATCCTAGATATCCAAGTTCAATGA 696 0.4871 MAHALSSNLTLNVPTSRYLLHSRPTQLKPVKFMVMGDAREKLDHIPKPNKNHHHHPLPKKKVSPTAPIGLWDRFPTARTMQEMMETMERMVEDPFAFSTLEWPSSPLPSEGVGGYRRRGRAPWEVKEGESEYKMRLDMPGMKKEDVKVWVEEKMLVVKAEKEAKKKEMVEEQEEEEEEGWSAKSYGRYSSRIALPENVQFENIKAEVKDGVLYIAIPKATTYSNILDIQVQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03418 231 CDD ACD_sHsps-like 124 218 - -
Viun1g03418 231 Pfam Hsp20/alpha crystallin family 125 230 IPR002068 -
Viun1g03418 231 MobiDBLite consensus disorder prediction 45 70 - -
Viun1g03418 231 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 20 231 IPR044587 GO:0009408
Viun1g03418 231 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 114 231 IPR002068 -
Viun1g03418 231 SUPERFAMILY HSP20-like chaperones 106 220 IPR008978 -
Viun1g03418 231 Gene3D - 70 230 IPR008978 -
Viun1g03418 231 Coils Coil 154 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03418 Viun-Chr1 41272454 41274488 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03418 K13993 - gmx:100811966 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03418 1 41272454 41274488 Viun1g03418 1 41272454 41274488 ECH