Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03403 ATGGCTTCGTATGATCAACAACAAGGAAAGCCATTACCCAAGTTTGGGGATTGGGATGTGAACGATCCTGCTTCAGCGGAAGGATTCACTGTTATATTCAACAAAGCCAGAGATGAAAAGAAAGTCGCCTCAGTCTCGGGACGATTCCCTTCTCAACGAAAACACGATTCTCGAAAACGCAAGAATCAAAAAAAGAGCAAGAGTTCCACTAACCCAAAGAAAAAATGGTTTTGCTTTGGCCCATAG 246 0.4309 MASYDQQQGKPLPKFGDWDVNDPASAEGFTVIFNKARDEKKVASVSGRFPSQRKHDSRKRKNQKKSKSSTNPKKKWFCFGP 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03403 81 MobiDBLite consensus disorder prediction 53 71 - -
Viun1g03403 81 MobiDBLite consensus disorder prediction 1 20 - -
Viun1g03403 81 MobiDBLite consensus disorder prediction 41 81 - -
Viun1g03403 81 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 5 78 IPR040387 -
Viun1g03403 81 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 7 41 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03403 Viun-Chr1 41218185 41219318 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03403 - - gmx:102669045 132.109