Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03388 ATGCTAATTTGGTGCATTTCAACCTTGAGTTCCTTTTTTTTCTTAATTTCAAACATGCAACGTGATAATCTTATAAAGAAGCTCCTCCTGACACATGATCCAGATGGTCGTAGGTTGGATTCTGAGGCAATTCTTCTTGCTGTGGGCAACATTATGTTTCATTCTTCCAAAATAATAGTGACTTCTAATTTATATTCTGCTGCCTTTCAGAAGAATGACATAACTGAAATTGAAACGATTGGTTGTAGTGAATCGGTAGGATTCATCATTACAAAAATATGCAAGATACTCTGCAGATGCTCTGGTGAAGGTGATATTAACTCAAGGGTCATAAATCTGTTTGATTTGATAGGAAAGTATAGCTGGGATGCAAAAGTAGTTCTAGTGCTTGCTGCTTTTGCTGTAAGATATGGTGAATTTTGGCAACTTATGCAGCTACATCGTGGTAACAGTTTGGCAGCTTTAATTTCAAGTATTAAGCAGCTTCCCTGCAACTTAAAGCCACTGAAGCTACAAATCAAGGCATTGAGCTTGTTGGTTGAGACCATGATGGATGTGGCTATGTGTATAATTAAGTTTGAATACTTACCTCTTCAACATGTTGAGCACGGAAATCATATATTCCGAGTCACAAAGTCTCAAATATACGAGGCTGCATACTGGATCGCCAGAAGCTGTTTAGCATGTTTTTCCCAAGTCAAGGACTTCACAATCAAGCCACATGAGCAAGTGTACTCAGATTCAGCAATAATTGCTGCTTGGGAGCTTTCGAGTTTGGCGTATAGATTAAGTGGTACATGCTGCAATCTTAGAAGACAGGTGGATCTGTGTTACGAAGAAATAGAGAGAAACTTGTATCAGAGGCTGTTGGATCTTGCTCGTGAGGATCACATTGATAATCAGAAGATTCTCACTTTATTTTTTCCTTCAAATAATTACTTGCCACTGAAGGATTGCTCCACAGAAACAAAGTTAAGTGTGTCTGAGCTGAAAAACAAGTTAGTTCTGTTGTTGATCACAAAACCACAGTTACTCAGCCCTGTAGATCTATTCTTACTTGTCCAGCAAACATGCGATCATCCTCTGAACGAGAGGCTGAAGGAGAGTTATAAGATTGTGTGGATTCCCCTTCCATCTTCTGATTCATGGACTGAAGCTGAAGAAAGTAGTTTTAATTTTCTGTCAGATTCCTTGCCTTGGCATGCTGTTCGGAAACCAAGGTTACTTAGCCCAGCAGTGATCAAGTACATAAGGGAAAGATGGAACTACAAGGATGAGCCCATCATGGTGGCTCTAGATTCAAGAGGGAAGGTCACGAATTACAATGCTCTTGATATGATCAACATTTGGGGAGCCAAAGCTTACCCTTTTTCAGCTTCCAAAGAGGAAGATCTGTGGCAAGACCAGAATTTGACCATGCAACTTTTGCTGGATGAGATCAATCCTCTCCTTGCTTATTGGGTTGAGCAAGGCAAAAGTATTTGCCTTTATGGGAGTGAAAACTTGGTTTGGATCCAACAATTCAATGATAAGATAAATGAGCTCAAACGAGCAGGTCTGCAGCTGGAAACAATATATGTTGGTAATAGTCAATTGGGTGAACATGTTAAGCAAATAATGGCAAGAAGTGGTGAAACTAGTCGCAGTGATCCACTTTCCTTCACAAACGTGCAATTCTTCTGGCTTCGGTTGGCGAGTATGAGAAGATCTAAACTCAGACTAGGGAAGACACAAAGTGGTGATTCTGTACTAGCAGAGTTGTCAGCTTTGCTTGAAATGGATGATAGGGAAGAAGGTTGGGCAGTGATTGGAAGTGGGGGTTCAACAGATATTATCAGGCTTCAAGGGATGCAGGTGATGGAATTCTTAAGGAAATGTTCTGTGTGGAGAGAAAATATAACCAAGTTTGGATTGTGGGGTGCTCCAAGAAACATCCTAGAAACTGATTTTGTTGAAGGGAGTTGCACTCACTCTTACTTTGTTCCCTCAAGAGAAAATGAAAGACCAAGTCAAGGAACTGTAATTTGTCAAGTGTGCAAGCGTCCCATGAAGAAGTTCGTGGTGTACAAGCCATGA 2076 0.4046 MLIWCISTLSSFFFLISNMQRDNLIKKLLLTHDPDGRRLDSEAILLAVGNIMFHSSKIIVTSNLYSAAFQKNDITEIETIGCSESVGFIITKICKILCRCSGEGDINSRVINLFDLIGKYSWDAKVVLVLAAFAVRYGEFWQLMQLHRGNSLAALISSIKQLPCNLKPLKLQIKALSLLVETMMDVAMCIIKFEYLPLQHVEHGNHIFRVTKSQIYEAAYWIARSCLACFSQVKDFTIKPHEQVYSDSAIIAAWELSSLAYRLSGTCCNLRRQVDLCYEEIERNLYQRLLDLAREDHIDNQKILTLFFPSNNYLPLKDCSTETKLSVSELKNKLVLLLITKPQLLSPVDLFLLVQQTCDHPLNERLKESYKIVWIPLPSSDSWTEAEESSFNFLSDSLPWHAVRKPRLLSPAVIKYIRERWNYKDEPIMVALDSRGKVTNYNALDMINIWGAKAYPFSASKEEDLWQDQNLTMQLLLDEINPLLAYWVEQGKSICLYGSENLVWIQQFNDKINELKRAGLQLETIYVGNSQLGEHVKQIMARSGETSRSDPLSFTNVQFFWLRLASMRRSKLRLGKTQSGDSVLAELSALLEMDDREEGWAVIGSGGSTDIIRLQGMQVMEFLRKCSVWRENITKFGLWGAPRNILETDFVEGSCTHSYFVPSRENERPSQGTVICQVCKRPMKKFVVYKP 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03388 691 Pfam Sieve element occlusion N-terminus 22 296 IPR027942 -
Viun1g03388 691 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 17 690 IPR039299 GO:0010088
Viun1g03388 691 Pfam Sieve element occlusion C-terminus 460 690 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03388 Viun-Chr1 41133350 41136814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03388 - - pvu:PHAVU_001G256100g 1244.95