Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03374 ATGACCAAACTGAAAGAGCTGATAGGGAGGTTGAAGGACAAAGCTTCGCAGGGCAAAGCCGCCATACTCTCCAAACGCGCCACTCTCTCTCTCCTACGCGCCACTAGCCACGACCCCTTCACCCCTCCTACCTCCAATCACATCTCCGCACTCCTCATCGCCGGCGATGGATCACGCGCCACGGCCTCCGCCGTCATGGAGCTTCTCATGGACCGCCTCCAGAGCACACAGAGCTCCGCCGTGGCGCTCAAGTGCCTCATCGCCGTCCACTACGTGTTAAAGCGCGGCAGCTTCATCATGAGGGATCAGCTTCCGTACAGGTGCGGCGGCAGCGGCGGCAGGAACTACCTTAACCTCTCCAAATTCCGCGACAGGAGCAGTCCCGTATCCTGGGAACTGTCTTCGTGGGTACGATGGTACGCTAAACACGTGGAACAGCTTCTCTGGGCCTCCAGGATCGTTGGCTTCTTCCTCGGCGTTGAAGCTCAAGAAGACTCAAGTCAAGGGATGAAAGCAGGAGAAGAGAGAGCTTCAGGTCTTAGCAACGGTGAGGTGTTGACGGAGACGGAGGCTCTGTTGGCGGTTATTGAAGGGATTGGAGGAATACCCGACGCAGCATCCATGGAAGGGAACAAGGTAGTTGGTGAGATATCAAGTATGGTGGAAGAGGATGTGATTGTGGCGCTGAGCGAGGTGTTGGTTAGAGTTAACGAGTTGAGGGAGCGTTTCGGGTGTCTGAGTTTCGGAGAAGTGGTGGAGTTGGTTTACGTGATGAACAGATTGGAGAAGTGCAAAGAGGTGGTGGAAGAGGTGGTGGTGGTTGCAGAGAAACAGAGATTATTATGGGATGCAGTGAGAGAAGTGAAGGAGAAGGTTGAGAAGAAGGTGTTTAGGGAAGAAGAGAAAACGATGAGAACACAGAGACACAGGGCAACAAAGTCAGATAGGTTTCAATTTCCAACGTTTTTTATCGATTCTGTTGATTTGGTCCGGTTTCCCTCCGCAAGGTTGTTGTTGTGA 1020 0.5314 MTKLKELIGRLKDKASQGKAAILSKRATLSLLRATSHDPFTPPTSNHISALLIAGDGSRATASAVMELLMDRLQSTQSSAVALKCLIAVHYVLKRGSFIMRDQLPYRCGGSGGRNYLNLSKFRDRSSPVSWELSSWVRWYAKHVEQLLWASRIVGFFLGVEAQEDSSQGMKAGEERASGLSNGEVLTETEALLAVIEGIGGIPDAASMEGNKVVGEISSMVEEDVIVALSEVLVRVNELRERFGCLSFGEVVELVYVMNRLEKCKEVVEEVVVVAEKQRLLWDAVREVKEKVEKKVFREEEKTMRTQRHRATKSDRFQFPTFFIDSVDLVRFPSARLLL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03374 339 Gene3D - 3 156 IPR008942 -
Viun1g03374 339 Pfam ANTH domain 30 158 IPR011417 GO:0005543
Viun1g03374 339 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 277 IPR045192 GO:0048268|GO:0072583
Viun1g03374 339 SMART enth_2 25 158 IPR013809 -
Viun1g03374 339 SUPERFAMILY ENTH/VHS domain 29 155 IPR008942 -
Viun1g03374 339 CDD ANTH_N_AP180_plant 29 151 - -
Viun1g03374 339 ProSiteProfiles ENTH domain profile. 19 158 IPR013809 -
Viun1g03374 339 FunFam Putative clathrin assembly protein At4g40080 3 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03374 Viun-Chr1 41059539 41061550 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03374 - K20043 gmx:100808393 413.69