Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03371 ATGGGACTTGTTTTCACCAAATGGGCATGCGCATTCTTACTCTGCTGTTGTCTCATCACTTCTGGGGTATATTCAGTGGAGGGGTTACATGGGAGTTCTAAAGTGAGAGGAGTGAACTTAGGAGGGTGGTTGGTCATCGAAGGTTGGATCAAGCCTTCACTGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGGGCAGAGGTGCAATTTAAGTCAGTGACGTCGCAGAAGTATGTATCTGCCGAGAATGGGGGAGGAATGAATGTGACAGTTGACAGGGATGTCCCATCTTCATGGGAAACCTTCAGGTTATGGAGAGCATCTGAATCTGAATTTCAATTTCGTACCTCTGAGGGCCAATTTCTTACGTGTGATGGTGGAGGCCACTCAGTCTCTGCAACAGCAAAATCTCCTTCAACATATGAGACATATGAAATTGAGCGGAGTGGAAAAAACAGGGTTCACCTCAAGATAAAGGGTGGATCATATCTTCAGGCTACAACAGATGGCCAGCTTTCAGCGAACTACCCAGGAACACCAGGATGGGATGATAATGCTGCCACGTTTGAAATGACAATTGTGTCAAATAACTTGCATGGAGATTACCAGCTAGCAAATGGATATGGGCATAATCGGGCAAAAGATGTTCTTAGGAGACATAGAAATAGCTTTATCACGATAGAGGATTTCAAATTTCTATATAAACATGGAATAAATACTGTGAGGATACCAGTTGGGTGGTGGATTGCTTTTGATCCTGATCCTCCGAGTCCATATATCGGTGGAACTCTTGAAGCTCTAGATAATGCATTTTTATGGGCACAAGAATATGATATCAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCTCAAAATGGAATGGAGCATAGTTCAAGCAGAGATGGATTTACGGGCTGGCCAACTTCCCCAGATTACATTTCTGAGTCATTACATGTTATTGAATTTTTAGTTTCAAGATATGCAAAACACCCAGCATTGCTGGGAATTGAGCTATTGAATGAACCATCAGCTGGCACAGTTTCATTAGATGTTTTGATTCCGTACTACAAGCAGGGCTACCAAATTGTTCGCAAATACTCTTCATCCGCTTACGTGATAATCTGCCAGAGAATTGGAGTTGCAGATCCTTTGGAACTATATCAAACCAACATAGGATCTCACAACATAGTTTTGGATTTGCATTTCTACAATCTCTTTGACCCATTCTTTGTTAACATGAGTGCTGTGGATAATATTCAATACATATACAAAAGCCGGGAAGGTCAACTTCAGGCCCTAAACAATTCAGATGGCCCACTTGTTTTAGTTGGAGAGTGGGTTAATGAGTGGAACGTGACAAACGGATCCCAAAAAGACTATCAGGACTTTGGAAGGGCACAGTTAGATGTCTATAATGCAGCTTCTTTTGGATGGTGTTATTGGACAGTAAAAAATGACAGAGAACACTGGGATTTAGAGTGGAACATTAGGAACAACTATCTTCAATTAGGTAACTCATCCAGCAAACGGAGCTTGAACATTCTACGATTGTTAGGATTGGCACTCACCTGGTTTTCTCTACTTCAATTTTTGTGA 1602 0.4182 MGLVFTKWACAFLLCCCLITSGVYSVEGLHGSSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGAEVQFKSVTSQKYVSAENGGGMNVTVDRDVPSSWETFRLWRASESEFQFRTSEGQFLTCDGGGHSVSATAKSPSTYETYEIERSGKNRVHLKIKGGSYLQATTDGQLSANYPGTPGWDDNAATFEMTIVSNNLHGDYQLANGYGHNRAKDVLRRHRNSFITIEDFKFLYKHGINTVRIPVGWWIAFDPDPPSPYIGGTLEALDNAFLWAQEYDIKCIIDLHAAPGSQNGMEHSSSRDGFTGWPTSPDYISESLHVIEFLVSRYAKHPALLGIELLNEPSAGTVSLDVLIPYYKQGYQIVRKYSSSAYVIICQRIGVADPLELYQTNIGSHNIVLDLHFYNLFDPFFVNMSAVDNIQYIYKSREGQLQALNNSDGPLVLVGEWVNEWNVTNGSQKDYQDFGRAQLDVYNAASFGWCYWTVKNDREHWDLEWNIRNNYLQLGNSSSKRSLNILRLLGLALTWFSLLQFL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03371 533 ProSitePatterns Glycosyl hydrolases family 5 signature. 336 345 IPR018087 GO:0004553|GO:0005975
Viun1g03371 533 Gene3D Glycosidases 29 85 - -
Viun1g03371 533 Gene3D Glycosidases 186 513 - -
Viun1g03371 533 Pfam Fascin domain 86 177 IPR022768 GO:0030674|GO:0051015
Viun1g03371 533 Pfam Cellulase (glycosyl hydrolase family 5) 226 488 IPR001547 GO:0004553|GO:0071704
Viun1g03371 533 SUPERFAMILY Actin-crosslinking proteins 69 189 IPR008999 -
Viun1g03371 533 SUPERFAMILY (Trans)glycosidases 32 504 IPR017853 -
Viun1g03371 533 Gene3D - 93 180 - -
Viun1g03371 533 PANTHER FASCIN 31 505 IPR010431 GO:0007015|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03371 Viun-Chr1 41043192 41047743 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03371 - - gmx:100809472 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03371 1 41043192 41047743 Viun1g03371 1 41043192 41047743 ECH