Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03351 ATGACGTTCTCAGTAGTCGAAGGTGGAAGCGAAAAGGCCAAACCCAAACCCGAGCCCTCTGATTTGAATACCGAAAGCATGAATCTGACGGCTGAAAACCTTTCACTTCCCTATGAAACATTCTTGAGAGCAGCAACTTCCCTCAAGGACAAGGTTGTGGAGGAAACTTGGAACCGGAGAGACCAGGTTGTTGATCCGACGGTGTATTCGGGACTCTTGGGCACTGCCTTCACTTGTTTGCGGTCGTACCAGGTTACCGGTTGCCGGAACGACTTGCTGTTATGCAGAGATATCGTTGACACGTGTGTCACCGCTGCACGTGCCTCGCTCAGCAACAGACACGTGACTTTTTTATGCGGTAGTGGAGGCGTTTATGCGCTTGGTGCCGTCGTTGCCAATTACATGGAGGACCTGAGAAAGCGTGACTTGTTTTTGGCTCTGTTCATTGAGGTGGCAAAAGAGAAAGCCCTACCAGTAGGACCAGAGGAAGGTGGTTTCGGAATGTCATATGATCTTATGTATGGACGTGCTGGATTCTTATGGGGTGCACTATTCCTAAACAAGCACTTAGGAGAAGAAGCAGTGCCAAAGGACATTCTTGTACCGATCATTGATGCAGTGTTGGCTGGTGGTAGAGCAGGAGCATCTGATATTAAAGAGTGTCCATTGATGTATAGATGGCATGGAACAAGGTACCTTGGTGCAGCAAATGGTCTTGCTGGTATCCTTCATGTGCTGCTTCATTTTCCTCTTCCCAGTGAGGATGCTGAGGATGTCAAAGGAACTTTAAGGTACCTCATGAGTAAGCGTTTCCCTCACAGTGGAAACTACCCCTCCAGTGAAGGGAATCCTAGGGATAAGCTAGTTCAATGGAGTCATGGTGCAACTGGCATGGCCATCACTTTCTGCAAAGCAGCACAAGTGTTTCCTAATGACAGAGAACTTCGAGATGCAGCGATAGAAGCAGGGGAAGTTGTGTGGAAAAGTGGATTGGTGAAGAAAATGGGACTTGCAGATGGGGTATCTGGAAATGCCTATGCCTTCCTTTCCCTATATCGACTCACTAAAGAGAGTATTTACGAAGAGAGAGCAAAATCATTCGCTTCTTGCTTGTATGACAATGCAAAATCTCTTGCTCCTGCCAATGGCTATTCACTCTTCCAAGGTCTTGCTGGAACGGCGTGCCTCTTGTTTGATCTGCTTCAACCCCAGAACTCTAGGTTCCCAGGTTATGAATTATAG 1242 0.475 MTFSVVEGGSEKAKPKPEPSDLNTESMNLTAENLSLPYETFLRAATSLKDKVVEETWNRRDQVVDPTVYSGLLGTAFTCLRSYQVTGCRNDLLLCRDIVDTCVTAARASLSNRHVTFLCGSGGVYALGAVVANYMEDLRKRDLFLALFIEVAKEKALPVGPEEGGFGMSYDLMYGRAGFLWGALFLNKHLGEEAVPKDILVPIIDAVLAGGRAGASDIKECPLMYRWHGTRYLGAANGLAGILHVLLHFPLPSEDAEDVKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGMAITFCKAAQVFPNDRELRDAAIEAGEVVWKSGLVKKMGLADGVSGNAYAFLSLYRLTKESIYEERAKSFASCLYDNAKSLAPANGYSLFQGLAGTACLLFDLLQPQNSRFPGYEL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03351 413 CDD euk_LANCL 68 409 - -
Viun1g03351 413 PRINTS Eukaryotic LanC-like protein family signature 200 215 IPR020464 -
Viun1g03351 413 PRINTS Eukaryotic LanC-like protein family signature 306 327 IPR020464 -
Viun1g03351 413 PRINTS Eukaryotic LanC-like protein family signature 351 369 IPR020464 -
Viun1g03351 413 PRINTS Eukaryotic LanC-like protein family signature 268 283 IPR020464 -
Viun1g03351 413 PRINTS Eukaryotic LanC-like protein family signature 399 413 IPR020464 -
Viun1g03351 413 PRINTS LanC-like protein superfamily signature 65 83 IPR007822 GO:0031179
Viun1g03351 413 PRINTS LanC-like protein superfamily signature 232 248 IPR007822 GO:0031179
Viun1g03351 413 PRINTS LanC-like protein superfamily signature 288 308 IPR007822 GO:0031179
Viun1g03351 413 PRINTS LanC-like protein superfamily signature 335 348 IPR007822 GO:0031179
Viun1g03351 413 PRINTS LanC-like protein superfamily signature 170 185 IPR007822 GO:0031179
Viun1g03351 413 PRINTS LanC-like protein superfamily signature 383 400 IPR007822 GO:0031179
Viun1g03351 413 SUPERFAMILY LanC-like 55 413 - -
Viun1g03351 413 PANTHER LANC-LIKE PROTEIN 38 413 - -
Viun1g03351 413 Gene3D - 15 413 IPR012341 GO:0005975
Viun1g03351 413 SMART LANC_like_2 62 413 IPR007822 GO:0031179
Viun1g03351 413 MobiDBLite consensus disorder prediction 1 24 - -
Viun1g03351 413 Pfam Lanthionine synthetase C-like protein 63 413 IPR007822 GO:0031179
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03351 Viun-Chr1 40926819 40930017 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03351 - - gmx:100785406 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03351 1 40926819 40930017 Viun1g03351 1 40926819 40930017 ECH