Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03334 ATGGGAAAAAGGCAATCTTTACGCAACAAAGCAACCCAATTTGTTTCTGTCCTTCTCAACCCCATCTCGGACTCCGACGCTCCCAAACCCTCCAAGATACCTCCACTCACTCCAACACCAACACCTCCTTCCGGAGAAGTAGGTGGATCAGAGAATGATGAAGAGATTATCCGTGGTTTAGCTGATGGACCTGATACTTCATCCTTCACTGCGTTTCTCTATTCCTTGTTGTCTTCATCTGATCCTGGAGATAATGCAAGCTCGCATGCGCAAAGTGATGATAGCAAAGGTGCTGCACCTGATCACAACCCTTTACCAGACTCGTTGCTGAAAGAAAATGGTGGGAGGAAAAGTTTGTTTTCCAAAAGCAAACAATCACTTGGCAGAGCCATTCGCAAAATTGGTGGATTTCGCTATCATGATCGCAGAGATAACCTTGAAATGAAATCGGAAGATGGGAGTGGCTCTAAGATTTCTGGTGTTGTTGAGATGAGGCGTTTTGAACCTGTGAAAGAGTCTGTGACTGCGCCTTTGGATGATCTTCCTGAAATTTCTGAACCTTCGGTTCTCCTTTCAGATAGTATGAAGAATGTTCTATATGTTTCTCTTCCACCGCTTATTCACGGAAGGAAATGGTTGTTGTTATACAGCACTTGGAGGCATGGTATATCACTTTCCACTCTTTACCGGAGAAGCATGATTTGGCCTGGATTGAGTTTGCTGATTGTTGGAGATAAAAAAGGAGCAGTATTTGGCAGCATTGTTGAAGCACCTCTCAGATCATCTAGCAAGAAAAAATACCAGGGAACAAACAATACATTTGTTTTCACAAATATATCTGGTCATCCTGTAATATATCGCCCAACAGGAGTCAATCGCTATTTCACACTTTGCAACACTGACTATTTAGCAATTGGTGGAGGAGGTCATTTTGCACTTTATCTGGATGGTGACCTATTGAATGGTTCAAGTTCAGTCTCAGAAACTTATGGGAATCCTTGTCTTGCAAATTCTCAAGATTTTGAAGTGAAGGAAGTAGAGTTATGGGGCTTTGTATATGCTTCAAAATATGAGGAAGTGCTAGCAATGAGCAGAACAGAAGCACCTGGGATCTGCCGATGGTAA 1125 0.4267 MGKRQSLRNKATQFVSVLLNPISDSDAPKPSKIPPLTPTPTPPSGEVGGSENDEEIIRGLADGPDTSSFTAFLYSLLSSSDPGDNASSHAQSDDSKGAAPDHNPLPDSLLKENGGRKSLFSKSKQSLGRAIRKIGGFRYHDRRDNLEMKSEDGSGSKISGVVEMRRFEPVKESVTAPLDDLPEISEPSVLLSDSMKNVLYVSLPPLIHGRKWLLLYSTWRHGISLSTLYRRSMIWPGLSLLIVGDKKGAVFGSIVEAPLRSSSKKKYQGTNNTFVFTNISGHPVIYRPTGVNRYFTLCNTDYLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLANSQDFEVKEVELWGFVYASKYEEVLAMSRTEAPGICRW 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03334 374 SMART 109ultra 188 352 IPR006571 -
Viun1g03334 374 MobiDBLite consensus disorder prediction 80 124 - -
Viun1g03334 374 ProSiteProfiles TLDc domain profile. 189 352 IPR006571 -
Viun1g03334 374 Pfam TLD 214 351 IPR006571 -
Viun1g03334 374 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 49 353 - -
Viun1g03334 374 MobiDBLite consensus disorder prediction 19 64 - -
Viun1g03334 374 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03334 Viun-Chr1 40808767 40812169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03334 211 360 EF-hand Containing Proteins AT5G06260 30.625 3.82e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03334 - - gmx:100804124 629.787