Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun1g03319 | ATGGCAACCCCAACGCGCCTCCTCCCTCTCCTCCTTTATCTACTCTCGCTATGCTTCGTCTCAACCGTTAGATCGGATGATGATTGTGTCTACTCGGTTTATATTCGGACGGGCTCCATCTTCAATGGAGGAACCGATTCAATAATTGGGCTCAAGCTCTACGACGCGCTCGGCAACGGTATATACATCACCAACCTCGAAACCTGGGGCGGGTTAATGGAGCCGGGTCACAACTACTTCGAACGGGGCAATCTCGACATTTTCAGCGGTAGAGGTCCATGCTTGGATGAGCCCGTTTGCGCCATCAATATAACTTCGGACGGGTCGGGGCCCCATCACGGCTGGTACGTAAACTACGTCGAGGTCACTTCCACCGGGGTCCACGCGAACTGCTCTCAGTCGTTGTTCACGGTGGAGCAGTGGATCGCAACCGACAGGTCGCCTTATCAGCTCTGGACTGTAAGGAACAACTGCCCAAACGTCTTGGGTCTGGCCCGTTCTAAAGCCCATTTCACCGATGTCGTCGGCTCTCGAAATGGGCCTGGGTCCGGTTTCTCTGTTTCGGCCCTGAAACGTTCGCGGGCAGGGATGTTATTTATGAAGTGGTAG | 609 | 0.5435 | MATPTRLLPLLLYLLSLCFVSTVRSDDDCVYSVYIRTGSIFNGGTDSIIGLKLYDALGNGIYITNLETWGGLMEPGHNYFERGNLDIFSGRGPCLDEPVCAINITSDGSGPHHGWYVNYVEVTSTGVHANCSQSLFTVEQWIATDRSPYQLWTVRNNCPNVLGLARSKAHFTDVVGSRNGPGSGFSVSALKRSRAGMLFMKW | 202 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun1g03319 | 202 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 30 | 147 | IPR036392 | GO:0005515 | |
| Viun1g03319 | 202 | ProSiteProfiles | PLAT domain profile. | 29 | 156 | IPR001024 | GO:0005515 | |
| Viun1g03319 | 202 | CDD | PLAT_plant_stress | 29 | 157 | - | - | |
| Viun1g03319 | 202 | Pfam | PLAT/LH2 domain | 31 | 149 | IPR001024 | GO:0005515 | |
| Viun1g03319 | 202 | Gene3D | PLAT/LH2 domain | 30 | 150 | - | - | |
| Viun1g03319 | 202 | PANTHER | PLAT DOMAIN-CONTAINING PROTEIN | 26 | 161 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun1g03319 | Viun-Chr1 | 40744320 | 40745311 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun1g03319 | - | - | pvu:PHAVU_001G251400g | 328.176 |