Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03310 ATGCTACTTGGAAAGCGCCCTCGCCCACCGATTATGAAAAGAACTACCAGCATGAGTGGTGGCATGGCCGTGGAATCGCCGACAACCGACGAGGAACTCGTCTCTGATAACCCTCACCATCATCATGAACCTAACATCAAAGTCGATCCACTTCTTGTTGCCATGGAAAGACATCATGAATTGGTGCCTCAAAATCTTTCTGAGGCCAAAGGGTCATCTTATGAATTATATGGGCAACGTTCGATGGGCATGGTCATACCACTTTCCCCGACAACCTCAAATAACCCTCGTCACAGTCACAACCACACAACAAACACTGTCATAAACACTACTTCTCACTTTCTTCGGACTTGTGGCCTCTGCAAGTGTCGCTTGGCACCCGATCGACGAGACATCTATATGTATAGGGGGGATACGGCATTTTGCAGTTTGGAGTGTAGGGAGAAGCAGATGAAGCAAGATCAGAGAAAAGAAAAGTGGAAGGCAGGGTCTAACAAGGAGCACCACCGTGCATCACCACCACCCGCCAAGCCTTCCACCAAAGGTGAAACGGCTGCGTGTAATTGA 567 0.4885 MLLGKRPRPPIMKRTTSMSGGMAVESPTTDEELVSDNPHHHHEPNIKVDPLLVAMERHHELVPQNLSEAKGSSYELYGQRSMGMVIPLSPTTSNNPRHSHNHTTNTVINTTSHFLRTCGLCKCRLAPDRRDIYMYRGDTAFCSLECREKQMKQDQRKEKWKAGSNKEHHRASPPPAKPSTKGETAACN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03310 188 MobiDBLite consensus disorder prediction 153 188 - -
Viun1g03310 188 MobiDBLite consensus disorder prediction 1 44 - -
Viun1g03310 188 Pfam zinc-finger of the FCS-type, C2-C2 110 157 IPR007650 -
Viun1g03310 188 ProSiteProfiles Zinc finger FLZ-type profile. 113 158 IPR007650 -
Viun1g03310 188 PANTHER FCS-LIKE ZINC FINGER 5 1 173 - -
Viun1g03310 188 MobiDBLite consensus disorder prediction 153 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03310 Viun-Chr1 40684596 40685786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03310 - - pvu:PHAVU_001G250900g 279.641