Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03283 ATGGAGGCACTTCAATCATGGGTTTCAGACCACAAACTCACCACCATTGGGGCGCTCTGGGCATCTGGAATTGGAGCATCACTTGTGACTTATTCATGCAAAAAGTCGCCAATGAAGCCTAGTCTCAGGCTTATCCATGCCAGGATGCATGCTCAGGCGCTAACTTTAGCAGTGTTATCTGGTGCAGCTGCTTACCATTATTATGAGAAACCTTCTCTTCAACCAAAACCAGTGGCAGATAATATTCCTGCCACCAGTTTCAACCACCTTCTCCAATATGAAATTCACTGTCCTTTCTAA 300 0.4533 MEALQSWVSDHKLTTIGALWASGIGASLVTYSCKKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYEKPSLQPKPVADNIPATSFNHLLQYEIHCPF 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03283 99 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 2 71 IPR040153 -
Viun1g03283 99 Pfam Hypoxia induced protein conserved region 11 61 IPR007667 -
Viun1g03283 99 Gene3D - 13 72 - -
Viun1g03283 99 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03283 Viun-Chr1 40470077 40470861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03283 - - gmx:100500345 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03283 1 40470077 40470861 Viun1g03283 1 40470077 40470861 ECH
Viun1g03283 1 40470077 40470861 Viun8g02409 8 33865171 33866022 PCT